Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MMP8P22894 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP8P22894 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
MMP8P22894 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.69■□□□□ 0.26
MMP8P22894 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP8P22894 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
MMP8P22894 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP8P22894 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.68■□□□□ 0.26
MMP8P22894 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MMP8P22894 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP8P22894 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP8P22894 LINC00554-201ENST00000564841 3011 ntBASIC16.68■□□□□ 0.26
MMP8P22894 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.68■□□□□ 0.26
MMP8P22894 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.68■□□□□ 0.26
MMP8P22894 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP8P22894 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP8P22894 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP8P22894 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.68■□□□□ 0.26
MMP8P22894 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP8P22894 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MMP8P22894 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP8P22894 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MMP8P22894 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP8P22894 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP8P22894 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
MMP8P22894 KLF2P3-201ENST00000451977 1087 ntBASIC16.68■□□□□ 0.26
MMP8P22894 SERBP1P3-201ENST00000459980 809 ntBASIC16.68■□□□□ 0.26
MMP8P22894 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.68■□□□□ 0.26
MMP8P22894 AC125807.1-201ENST00000483097 614 ntBASIC16.68■□□□□ 0.26
MMP8P22894 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.68■□□□□ 0.26
MMP8P22894 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.68■□□□□ 0.26
MMP8P22894 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.68■□□□□ 0.26
MMP8P22894 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.68■□□□□ 0.26
MMP8P22894 TEX28P1-201ENST00000613479 1221 ntBASIC16.68■□□□□ 0.26
MMP8P22894 AL138828.2-201ENST00000615812 383 ntBASIC16.68■□□□□ 0.26
MMP8P22894 TEX28P2-201ENST00000617764 1221 ntBASIC16.68■□□□□ 0.26
MMP8P22894 AC093028.1-201ENST00000622998 982 ntBASIC16.68■□□□□ 0.26
MMP8P22894 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.68■□□□□ 0.26
MMP8P22894 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP8P22894 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MMP8P22894 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MMP8P22894 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP8P22894 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.68■□□□□ 0.26
MMP8P22894 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.68■□□□□ 0.26
MMP8P22894 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MMP8P22894 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP8P22894 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP8P22894 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MMP8P22894 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.68■□□□□ 0.26
MMP8P22894 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.68■□□□□ 0.26
MMP8P22894 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.68■□□□□ 0.26
MMP8P22894 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MMP8P22894 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.68■□□□□ 0.26
MMP8P22894 AC112693.3-201ENST00000624819 1983 ntBASIC16.68■□□□□ 0.26
MMP8P22894 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MMP8P22894 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP8P22894 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.67■□□□□ 0.26
MMP8P22894 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.67■□□□□ 0.26
MMP8P22894 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP8P22894 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.67■□□□□ 0.26
MMP8P22894 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.67■□□□□ 0.26
MMP8P22894 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.67■□□□□ 0.26
MMP8P22894 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
MMP8P22894 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP8P22894 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP8P22894 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MMP8P22894 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.67■□□□□ 0.26
MMP8P22894 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MMP8P22894 AC074338.1-201ENST00000416825 156 ntBASIC16.67■□□□□ 0.26
MMP8P22894 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.67■□□□□ 0.26
MMP8P22894 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.67■□□□□ 0.26
MMP8P22894 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.67■□□□□ 0.26
MMP8P22894 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.67■□□□□ 0.26
MMP8P22894 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.67■□□□□ 0.26
MMP8P22894 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP8P22894 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.67■□□□□ 0.26
MMP8P22894 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.67■□□□□ 0.26
MMP8P22894 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.67■□□□□ 0.26
MMP8P22894 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.67■□□□□ 0.26
MMP8P22894 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.67■□□□□ 0.26
MMP8P22894 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.67■□□□□ 0.26
MMP8P22894 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP8P22894 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP8P22894 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP8P22894 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
MMP8P22894 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.67■□□□□ 0.26
MMP8P22894 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
MMP8P22894 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP8P22894 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
MMP8P22894 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.67■□□□□ 0.26
MMP8P22894 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MMP8P22894 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP8P22894 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
MMP8P22894 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MMP8P22894 Z97205.2-201ENST00000564697 1639 ntBASIC16.67■□□□□ 0.26
MMP8P22894 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
MMP8P22894 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MMP8P22894 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MMP8P22894 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
MMP8P22894 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms