Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 HAUS4P1-201ENST00000406739 1145 ntBASIC16.21■□□□□ 0.19
CAPN8A6NHC0 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.21■□□□□ 0.19
CAPN8A6NHC0 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.21■□□□□ 0.19
CAPN8A6NHC0 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.21■□□□□ 0.19
CAPN8A6NHC0 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CAPN8A6NHC0 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CAPN8A6NHC0 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CAPN8A6NHC0 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
CAPN8A6NHC0 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CAPN8A6NHC0 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 AL139010.1-201ENST00000454878 894 ntBASIC16.2■□□□□ 0.18
CAPN8A6NHC0 AC022494.1-201ENST00000466044 728 ntBASIC16.2■□□□□ 0.18
CAPN8A6NHC0 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN8A6NHC0 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms