Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF103-CHMP3A0A140T963 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF103-CHMP3A0A140T963 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RNF103-CHMP3A0A140T963 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF103-CHMP3A0A140T963 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF103-CHMP3A0A140T963 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF103-CHMP3A0A140T963 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF103-CHMP3A0A140T963 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF103-CHMP3A0A140T963 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF103-CHMP3A0A140T963 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF103-CHMP3A0A140T963 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF103-CHMP3A0A140T963 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF103-CHMP3A0A140T963 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.43■□□□□ 0.06
RNF103-CHMP3A0A140T963 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF103-CHMP3A0A140T963 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
RNF103-CHMP3A0A140T963 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF103-CHMP3A0A140T963 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RNF103-CHMP3A0A140T963 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.43■□□□□ 0.06
RNF103-CHMP3A0A140T963 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.43■□□□□ 0.06
RNF103-CHMP3A0A140T963 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF103-CHMP3A0A140T963 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
RNF103-CHMP3A0A140T963 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 U82695.1-201ENST00000635752 1889 ntBASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 MIR648-201ENST00000385046 94 ntBASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 IGHV3-22-201ENST00000520721 359 ntBASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 AL662844.1-201ENST00000546340 181 ntBASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 AC096734.2-201ENST00000562054 433 ntBASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 SLC25A6P4-201ENST00000586535 553 ntBASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.42■□□□□ 0.06
RNF103-CHMP3A0A140T963 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF103-CHMP3A0A140T963 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RNF103-CHMP3A0A140T963 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF103-CHMP3A0A140T963 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF103-CHMP3A0A140T963 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF103-CHMP3A0A140T963 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF103-CHMP3A0A140T963 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF103-CHMP3A0A140T963 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF103-CHMP3A0A140T963 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF103-CHMP3A0A140T963 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF103-CHMP3A0A140T963 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RNF103-CHMP3A0A140T963 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RNF103-CHMP3A0A140T963 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF103-CHMP3A0A140T963 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF103-CHMP3A0A140T963 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RNF103-CHMP3A0A140T963 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF103-CHMP3A0A140T963 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.41■□□□□ 0.06
RNF103-CHMP3A0A140T963 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.41■□□□□ 0.06
RNF103-CHMP3A0A140T963 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.41■□□□□ 0.06
RNF103-CHMP3A0A140T963 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF103-CHMP3A0A140T963 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.41■□□□□ 0.06
RNF103-CHMP3A0A140T963 Z83851.2-201ENST00000609564 659 ntBASIC15.41■□□□□ 0.06
RNF103-CHMP3A0A140T963 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RNF103-CHMP3A0A140T963 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF103-CHMP3A0A140T963 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.41■□□□□ 0.06
RNF103-CHMP3A0A140T963 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF103-CHMP3A0A140T963 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF103-CHMP3A0A140T963 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF103-CHMP3A0A140T963 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF103-CHMP3A0A140T963 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RNF103-CHMP3A0A140T963 AL109954.1-202ENST00000564051 2148 ntBASIC15.41■□□□□ 0.06
RNF103-CHMP3A0A140T963 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RNF103-CHMP3A0A140T963 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF103-CHMP3A0A140T963 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms