Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 AC092580.3-201ENST00000430932 139 ntBASIC14.78□□□□□ -0.04
UBQLN3Q9H347 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 AC097493.3-201ENST00000509725 367 ntBASIC14.78□□□□□ -0.04
UBQLN3Q9H347 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
UBQLN3Q9H347 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBQLN3Q9H347 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.77□□□□□ -0.04
UBQLN3Q9H347 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
UBQLN3Q9H347 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
UBQLN3Q9H347 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.77□□□□□ -0.04
UBQLN3Q9H347 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBQLN3Q9H347 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.77□□□□□ -0.04
UBQLN3Q9H347 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBQLN3Q9H347 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBQLN3Q9H347 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
UBQLN3Q9H347 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.77□□□□□ -0.04
UBQLN3Q9H347 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
UBQLN3Q9H347 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBQLN3Q9H347 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.77□□□□□ -0.04
UBQLN3Q9H347 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.77□□□□□ -0.04
UBQLN3Q9H347 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBQLN3Q9H347 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBQLN3Q9H347 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
UBQLN3Q9H347 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
UBQLN3Q9H347 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBQLN3Q9H347 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.77□□□□□ -0.05
UBQLN3Q9H347 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
UBQLN3Q9H347 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.77□□□□□ -0.05
UBQLN3Q9H347 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.77□□□□□ -0.05
UBQLN3Q9H347 BCRP1-201ENST00000444246 691 ntBASIC14.77□□□□□ -0.05
UBQLN3Q9H347 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.77□□□□□ -0.05
UBQLN3Q9H347 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.77□□□□□ -0.05
UBQLN3Q9H347 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.77□□□□□ -0.05
UBQLN3Q9H347 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.77□□□□□ -0.05
UBQLN3Q9H347 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
UBQLN3Q9H347 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.77□□□□□ -0.05
UBQLN3Q9H347 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
UBQLN3Q9H347 AC105021.1-202ENST00000570572 669 ntBASIC14.77□□□□□ -0.05
UBQLN3Q9H347 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.77□□□□□ -0.05
UBQLN3Q9H347 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.77□□□□□ -0.05
UBQLN3Q9H347 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.77□□□□□ -0.05
UBQLN3Q9H347 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBQLN3Q9H347 AC011467.4-201ENST00000594891 528 ntBASIC14.77□□□□□ -0.05
UBQLN3Q9H347 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.77□□□□□ -0.05
UBQLN3Q9H347 AL096865.1-201ENST00000606796 927 ntBASIC14.77□□□□□ -0.05
UBQLN3Q9H347 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.77□□□□□ -0.05
UBQLN3Q9H347 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
UBQLN3Q9H347 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.77□□□□□ -0.05
UBQLN3Q9H347 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBQLN3Q9H347 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
UBQLN3Q9H347 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBQLN3Q9H347 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
UBQLN3Q9H347 AC013268.4-201ENST00000637413 2228 ntBASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms