Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CHRNA3P32297 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA3P32297 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CHRNA3P32297 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.83■□□□□ 0.28
CHRNA3P32297 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.83■□□□□ 0.28
CHRNA3P32297 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA3P32297 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.83■□□□□ 0.28
CHRNA3P32297 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.83■□□□□ 0.28
CHRNA3P32297 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.83■□□□□ 0.28
CHRNA3P32297 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA3P32297 AC069335.1-201ENST00000489972 472 ntBASIC16.83■□□□□ 0.28
CHRNA3P32297 HLA-J-203ENST00000494367 1087 ntBASIC16.83■□□□□ 0.28
CHRNA3P32297 IGHV3-62-201ENST00000520057 340 ntBASIC16.83■□□□□ 0.28
CHRNA3P32297 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA3P32297 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CHRNA3P32297 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.83■□□□□ 0.28
CHRNA3P32297 AC004449.1-201ENST00000564240 433 ntBASIC16.83■□□□□ 0.28
CHRNA3P32297 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA3P32297 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA3P32297 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.83■□□□□ 0.28
CHRNA3P32297 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA3P32297 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA3P32297 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA3P32297 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.82■□□□□ 0.28
CHRNA3P32297 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
CHRNA3P32297 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA3P32297 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA3P32297 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CHRNA3P32297 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA3P32297 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CHRNA3P32297 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.82■□□□□ 0.28
CHRNA3P32297 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA3P32297 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.82■□□□□ 0.28
CHRNA3P32297 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CHRNA3P32297 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA3P32297 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA3P32297 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.82■□□□□ 0.28
CHRNA3P32297 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA3P32297 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.82■□□□□ 0.28
CHRNA3P32297 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA3P32297 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA3P32297 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.82■□□□□ 0.28
CHRNA3P32297 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.82■□□□□ 0.28
CHRNA3P32297 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA3P32297 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA3P32297 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.82■□□□□ 0.28
CHRNA3P32297 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA3P32297 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA3P32297 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.82■□□□□ 0.28
CHRNA3P32297 AL645939.2-201ENST00000427340 991 ntBASIC16.82■□□□□ 0.28
CHRNA3P32297 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA3P32297 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.82■□□□□ 0.28
CHRNA3P32297 LINC01225-203ENST00000563550 1244 ntBASIC16.82■□□□□ 0.28
CHRNA3P32297 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.82■□□□□ 0.28
CHRNA3P32297 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.82■□□□□ 0.28
CHRNA3P32297 AC009093.7-201ENST00000623853 1223 ntBASIC16.82■□□□□ 0.28
CHRNA3P32297 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA3P32297 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA3P32297 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA3P32297 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA3P32297 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA3P32297 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.82■□□□□ 0.28
CHRNA3P32297 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA3P32297 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.82■□□□□ 0.28
CHRNA3P32297 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA3P32297 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA3P32297 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.82■□□□□ 0.28
CHRNA3P32297 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA3P32297 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA3P32297 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.82■□□□□ 0.28
CHRNA3P32297 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CHRNA3P32297 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA3P32297 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA3P32297 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA3P32297 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CHRNA3P32297 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA3P32297 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA3P32297 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.81■□□□□ 0.28
CHRNA3P32297 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA3P32297 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA3P32297 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA3P32297 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA3P32297 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA3P32297 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA3P32297 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.81■□□□□ 0.28
CHRNA3P32297 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA3P32297 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA3P32297 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.81■□□□□ 0.28
CHRNA3P32297 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.81■□□□□ 0.28
CHRNA3P32297 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA3P32297 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA3P32297 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CHRNA3P32297 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA3P32297 KRT18P32-201ENST00000424695 1287 ntBASIC16.81■□□□□ 0.28
CHRNA3P32297 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.81■□□□□ 0.28
CHRNA3P32297 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.81■□□□□ 0.28
CHRNA3P32297 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.81■□□□□ 0.28
CHRNA3P32297 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA3P32297 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.81■□□□□ 0.28
CHRNA3P32297 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms