Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 COQ8A-209ENST00000489044 941 ntTSL 318.01■□□□□ 0.473e-9■■□□□ 11.7
RPS3P23396 IPO4-208ENST00000559253 579 ntTSL 415.9■□□□□ 0.143e-9■■□□□ 11.7
RPS3P23396 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.65■□□□□ 0.13e-9■■□□□ 11.7
RPS3P23396 EIF3G-210ENST00000590158 1034 ntTSL 215.46■□□□□ 0.073e-9■■□□□ 11.7
RPS3P23396 SLC13A3-209ENST00000468915 1597 ntTSL 514.68□□□□□ -0.062e-6■■□□□ 11.7
RPS3P23396 MTHFD1-204ENST00000553405 833 ntTSL 214.63□□□□□ -0.073e-9■■□□□ 11.7
RPS3P23396 IPO4-210ENST00000559635 492 ntTSL 313.59□□□□□ -0.233e-9■■□□□ 11.7
RPS3P23396 SMARCD2-204ENST00000450364 993 ntTSL 513.23□□□□□ -0.293e-9■■□□□ 11.7
RPS3P23396 IPO4-206ENST00000558718 554 ntTSL 212.79□□□□□ -0.363e-9■■□□□ 11.7
RPS3P23396 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.496e-9■■□□□ 11.7
RPS3P23396 SLC13A3-201ENST00000279027 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.572e-6■■□□□ 11.7
RPS3P23396 MTHFD1-213ENST00000556284 932 ntTSL 59.93□□□□□ -0.823e-9■■□□□ 11.7
RPS3P23396 SLC13A3-210ENST00000472148 3283 ntTSL 5 BASIC9.81□□□□□ -0.842e-6■■□□□ 11.7
RPS3P23396 IPO4-221ENST00000625289 297 ntTSL 5 BASIC8.87□□□□□ -0.993e-9■■□□□ 11.7
RPS3P23396 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC7.51□□□□□ -1.212e-6■■□□□ 11.7
RPS3P23396 PPP1CB-204ENST00000418910 281 ntTSL 20.09□□□□□ -2.43e-9■■□□□ 11.7
RPS3P23396 HSD17B12-214ENST00000638034 546 ntTSL 52.8□□□□□ -1.961e-6■■□□□ 11.7
RPS3P23396 HSD17B12-204ENST00000527213 571 ntTSL 41.96□□□□□ -2.11e-6■■□□□ 11.7
RPS3P23396 G6PC3-207ENST00000591696 805 ntTSL 315.3■□□□□ 0.049e-7■■□□□ 11.7
RPS3P23396 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.321e-9■■□□□ 11.7
RPS3P23396 TMEM37-204ENST00000465296 820 ntTSL 315.54■□□□□ 0.081e-9■■□□□ 11.7
RPS3P23396 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.53■□□□□ 0.081e-9■■□□□ 11.7
RPS3P23396 USP14-208ENST00000582707 1803 ntTSL 5 BASIC13□□□□□ -0.332e-8■■□□□ 11.7
RPS3P23396 USP14-202ENST00000383589 2168 ntTSL 5 BASIC11.63□□□□□ -0.552e-8■■□□□ 11.7
RPS3P23396 USP14-203ENST00000400266 1681 ntTSL 2 BASIC11.3□□□□□ -0.62e-8■■□□□ 11.7
RPS3P23396 USP14-205ENST00000578942 3189 ntTSL 210.6□□□□□ -0.712e-8■■□□□ 11.7
RPS3P23396 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.082e-8■■□□□ 11.7
RPS3P23396 A2M-213ENST00000546069 593 ntTSL 56.73□□□□□ -1.333e-40■■□□□ 11.7
RPS3P23396 KRT8-206ENST00000546900 523 ntTSL 318.85■□□□□ 0.619e-7■■□□□ 11.7
RPS3P23396 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.162e-7■■□□□ 11.7
RPS3P23396 METTL9-210ENST00000570074 447 ntTSL 319.62■□□□□ 0.732e-7■■□□□ 11.7
RPS3P23396 METTL9-203ENST00000562379 701 ntTSL 218.83■□□□□ 0.62e-7■■□□□ 11.7
RPS3P23396 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.222e-7■■□□□ 11.7
RPS3P23396 METTL9-207ENST00000567404 763 ntTSL 33.54□□□□□ -1.842e-7■■□□□ 11.7
RPS3P23396 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.024e-10■■□□□ 11.7
RPS3P23396 CSNK1A1-201ENST00000261798 6067 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.714e-10■■□□□ 11.7
RPS3P23396 CSNK1A1-208ENST00000523203 775 ntTSL 59.92□□□□□ -0.824e-10■■□□□ 11.7
RPS3P23396 CDIPT-203ENST00000562041 1129 ntTSL 323.2■■□□□ 1.31e-13■■□□□ 11.7
RPS3P23396 MRPL52-217ENST00000557543 2020 ntTSL 218.44■□□□□ 0.548e-18■■□□□ 11.7
RPS3P23396 MRPL52-207ENST00000553482 595 ntTSL 318.35■□□□□ 0.538e-18■■□□□ 11.7
RPS3P23396 MRPL52-212ENST00000556214 579 ntTSL 217.32■□□□□ 0.368e-18■■□□□ 11.7
RPS3P23396 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.63□□□□□ -0.078e-18■■□□□ 11.7
RPS3P23396 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.52■□□□□ 0.41e-7■■□□□ 11.7
RPS3P23396 AC140504.1-203ENST00000567442 476 ntTSL 215.96■□□□□ 0.151e-7■■□□□ 11.7
RPS3P23396 A2M-204ENST00000467091 533 ntTSL 53.27□□□□□ -1.893e-71■■□□□ 11.7
RPS3P23396 TRAP1-213ENST00000575707 785 ntTSL 515.89■□□□□ 0.131e-10■■□□□ 11.7
RPS3P23396 TRAP1-210ENST00000574494 547 ntTSL 213.96□□□□□ -0.171e-10■■□□□ 11.7
RPS3P23396 FN1-222ENST00000485567 584 ntTSL 1 (best)2.49□□□□□ -2.012e-73■■□□□ 11.7
RPS3P23396 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.09■□□□□ 0.013e-6■■□□□ 11.7
RPS3P23396 AAAS-220ENST00000552876 2016 ntTSL 214.73□□□□□ -0.053e-6■■□□□ 11.7
RPS3P23396 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.31□□□□□ -0.283e-6■■□□□ 11.7
RPS3P23396 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.33e-6■■□□□ 11.7
RPS3P23396 CNP-209ENST00000591945 576 ntTSL 322.07■■□□□ 1.125e-9■■□□□ 11.7
RPS3P23396 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.76■□□□□ 0.115e-8■■□□□ 11.7
RPS3P23396 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.035e-8■■□□□ 11.7
RPS3P23396 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.95□□□□□ -0.025e-8■■□□□ 11.7
RPS3P23396 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.9□□□□□ -0.025e-8■■□□□ 11.7
RPS3P23396 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.82□□□□□ -0.045e-8■■□□□ 11.7
RPS3P23396 EIF4G1-222ENST00000442406 5129 ntTSL 1 (best)13.76□□□□□ -0.215e-8■■□□□ 11.7
RPS3P23396 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC12.53□□□□□ -0.45e-8■■□□□ 11.7
RPS3P23396 SEC31A-206ENST00000436790 1717 ntTSL 1 (best)14.96□□□□□ -0.013e-7■■□□□ 11.7
RPS3P23396 SRSF7-206ENST00000431066 1847 ntTSL 510.86□□□□□ -0.672e-7■■□□□ 11.7
RPS3P23396 SRSF7-201ENST00000313117 2489 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.682e-7■■□□□ 11.7
RPS3P23396 SRSF7-208ENST00000443213 1903 ntTSL 510.45□□□□□ -0.742e-7■■□□□ 11.7
RPS3P23396 SRSF7-209ENST00000446327 2453 ntTSL 2 BASIC10.12□□□□□ -0.792e-7■■□□□ 11.7
RPS3P23396 SRSF7-205ENST00000425941 1944 ntTSL 59.91□□□□□ -0.822e-7■■□□□ 11.7
RPS3P23396 SRSF7-204ENST00000425778 2857 ntTSL 28.62□□□□□ -1.032e-7■■□□□ 11.7
RPS3P23396 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC7.31□□□□□ -1.242e-7■■□□□ 11.7
RPS3P23396 ACAA1-205ENST00000421218 869 ntTSL 517.02■□□□□ 0.324e-8■■□□□ 11.7
RPS3P23396 WDR1-209ENST00000505851 715 ntTSL 221.32■■□□□ 19e-7■■□□□ 11.7
RPS3P23396 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.468e-11■■□□□ 11.7
RPS3P23396 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.84■□□□□ 0.458e-11■■□□□ 11.7
RPS3P23396 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.068e-11■■□□□ 11.7
RPS3P23396 WDR1-216ENST00000514319 719 ntTSL 513.14□□□□□ -0.319e-7■■□□□ 11.7
RPS3P23396 FBLN1-218ENST00000484531 350 ntTSL 211.86□□□□□ -0.518e-8■■□□□ 11.7
RPS3P23396 WDR1-201ENST00000264785 549 ntTSL 46.83□□□□□ -1.329e-7■■□□□ 11.7
RPS3P23396 POR-206ENST00000421059 631 ntTSL 420.36■□□□□ 0.852e-14■■□□□ 11.7
RPS3P23396 POR-205ENST00000418341 736 ntTSL 46.45□□□□□ -1.382e-14■■□□□ 11.7
RPS3P23396 POR-214ENST00000449920 283 ntTSL 54.95□□□□□ -1.622e-14■■□□□ 11.7
RPS3P23396 EIF3D-209ENST00000462641 887 ntTSL 210.34□□□□□ -0.754e-7■■□□□ 11.7
RPS3P23396 PTPRF-204ENST00000412568 4154 ntTSL 510.74□□□□□ -0.691e-6■■□□□ 11.7
RPS3P23396 COL18A1-205ENST00000423214 839 ntTSL 515.43■□□□□ 0.068e-18■■□□□ 11.7
RPS3P23396 SEMA3B-201ENST00000416295 1088 ntTSL 517.6■□□□□ 0.414e-8■■□□□ 11.7
RPS3P23396 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.021e-6■■□□□ 11.7
RPS3P23396 PHPT1-205ENST00000492540 1316 ntTSL 1 (best)18.48■□□□□ 0.551e-6■■□□□ 11.7
RPS3P23396 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.72■□□□□ 0.271e-6■■□□□ 11.7
RPS3P23396 PHPT1-203ENST00000462205 619 ntTSL 313.98□□□□□ -0.171e-6■■□□□ 11.7
RPS3P23396 PHPT1-204ENST00000463215 627 ntTSL 213.81□□□□□ -0.21e-6■■□□□ 11.7
RPS3P23396 PHPT1-206ENST00000497413 618 ntTSL 212.51□□□□□ -0.411e-6■■□□□ 11.7
RPS3P23396 TRIB3-204ENST00000615226 877 ntTSL 34.84□□□□□ -1.632e-8■■□□□ 11.7
RPS3P23396 PEG10-207ENST00000613043 574 ntTSL 512.48□□□□□ -0.412e-32■■□□□ 11.7
RPS3P23396 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.252e-6■■□□□ 11.7
RPS3P23396 NUB1-212ENST00000568733 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.382e-6■■□□□ 11.7
RPS3P23396 NUB1-202ENST00000460712 664 ntTSL 212.02□□□□□ -0.492e-6■■□□□ 11.7
RPS3P23396 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.532e-7■■□□□ 11.7
RPS3P23396 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC24.17■■□□□ 1.462e-7■■□□□ 11.7
RPS3P23396 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.21■■□□□ 1.312e-7■■□□□ 11.7
RPS3P23396 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.04■■□□□ 1.282e-7■■□□□ 11.7
RPS3P23396 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.26■□□□□ 0.993e-6■■□□□ 11.7
RPS3P23396 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.84■□□□□ 0.612e-7■■□□□ 11.7
Retrieved 100 of 24,271 protein–RNA pairs in 281.5 ms