RNA–Protein interactions for RNA: ENST00000460712.1

NUB1-202, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

TSL 2

Gene NUB1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-202ENST00000460712 NISCHQ9Y2I1 1504 aa29.33■■■□□ 2.29
NUB1-202ENST00000460712 CCDC180Q9P1Z9 1646 aa26.06■■□□□ 1.76
NUB1-202ENST00000460712 ABCC9O60706 1549 aa25.18■■□□□ 1.62
NUB1-202ENST00000460712 ZCCHC6Q5VYS8 1495 aaKnown RBP24.49■■□□□ 1.51
NUB1-202ENST00000460712 NACADO15069 1562 aa24.44■■□□□ 1.5
NUB1-202ENST00000460712 RB1CC1Q8TDY2 1594 aa24.42■■□□□ 1.5
NUB1-202ENST00000460712 MYO15BQ96JP2 1530 aa24.4■■□□□ 1.5
NUB1-202ENST00000460712 DCAF1Q9Y4B6 1507 aa24.35■■□□□ 1.49
NUB1-202ENST00000460712 DCAF8L2P0C7V8 631 aa24.32■■□□□ 1.48
NUB1-202ENST00000460712 UNC13AQ9UPW8 1703 aa23.8■■□□□ 1.4
NUB1-202ENST00000460712 SCRIBQ14160 1630 aa23.7■■□□□ 1.39
NUB1-202ENST00000460712 BICRAQ9NZM4 1560 aa23.6■■□□□ 1.37
NUB1-202ENST00000460712 SHROOM4Q9ULL8 1493 aa23.52■■□□□ 1.36
NUB1-202ENST00000460712 PABPN1Q86U42 306 aaKnown RBP eCLIP23.51■■□□□ 1.35
NUB1-202ENST00000460712 EIF4G1Q04637 1599 aaKnown RBP22.99■■□□□ 1.27
NUB1-202ENST00000460712 DNAJC5BQ9UF47 199 aa22.84■■□□□ 1.25
NUB1-202ENST00000460712 CC2D2AQ9P2K1 1620 aa22.83■■□□□ 1.25
NUB1-202ENST00000460712 BAZ1AQ9NRL2 1556 aaPredicted RBP22.76■■□□□ 1.23
NUB1-202ENST00000460712 CECR2Q9BXF3 1484 aa22.75■■□□□ 1.23
NUB1-202ENST00000460712 SMARCA4P51532 1647 aa22.73■■□□□ 1.23
NUB1-202ENST00000460712 SMARCA2P51531 1590 aa22.58■■□□□ 1.2
NUB1-202ENST00000460712 MROH2BQ7Z745 1585 aa22.56■■□□□ 1.2
NUB1-202ENST00000460712 PEG3Q9GZU2 1588 aa22.54■■□□□ 1.2
NUB1-202ENST00000460712 ATAD2BQ9ULI0 1458 aa22.54■■□□□ 1.2
NUB1-202ENST00000460712 NCAPD3P42695 1498 aa22.52■■□□□ 1.2
NUB1-202ENST00000460712 HMGXB3Q12766 1538 aa22.47■■□□□ 1.19
NUB1-202ENST00000460712 BAZ1BQ9UIG0 1483 aaKnown RBP22.39■■□□□ 1.17
NUB1-202ENST00000460712 RSF1Q96T23 1441 aaPredicted RBP22.39■■□□□ 1.17
NUB1-202ENST00000460712 WIZO95785 1651 aa22.33■■□□□ 1.17
NUB1-202ENST00000460712 TOP2AP11388 1531 aaKnown RBP22.17■■□□□ 1.14
NUB1-202ENST00000460712 LAMC3Q9Y6N6 1575 aa21.92■■□□□ 1.1
NUB1-202ENST00000460712 SUPT5HO00267 1087 aaKnown RBP21.89■■□□□ 1.09
NUB1-202ENST00000460712 CADPSQ9ULU8 1353 aa21.86■■□□□ 1.09
NUB1-202ENST00000460712 CCDC88BA6NC98 1476 aa21.85■■□□□ 1.09
NUB1-202ENST00000460712 NESP48681 1621 aa21.83■■□□□ 1.08
NUB1-202ENST00000460712 CFTRP13569 1480 aa21.78■■□□□ 1.08
NUB1-202ENST00000460712 PDS5BQ9NTI5 1447 aa21.76■■□□□ 1.07
NUB1-202ENST00000460712 ERCC6Q03468 1493 aa21.75■■□□□ 1.07
NUB1-202ENST00000460712 PRDM2Q13029 1718 aa21.69■■□□□ 1.06
NUB1-202ENST00000460712 KIF21AQ7Z4S6 1674 aa21.63■■□□□ 1.05
NUB1-202ENST00000460712 FANCD2Q9BXW9 1451 aa21.6■■□□□ 1.05
NUB1-202ENST00000460712 CEP164Q9UPV0 1460 aa21.58■■□□□ 1.05
NUB1-202ENST00000460712 THOC2Q8NI27 1593 aaKnown RBP21.54■■□□□ 1.04
NUB1-202ENST00000460712 MRC2Q9UBG0 1479 aa21.52■■□□□ 1.03
NUB1-202ENST00000460712 CUX2O14529 1486 aa21.49■■□□□ 1.03
NUB1-202ENST00000460712 WDR62O43379 1518 aa21.45■■□□□ 1.02
NUB1-202ENST00000460712 ABCC8Q09428 1581 aa21.36■■□□□ 1.01
NUB1-202ENST00000460712 URB2Q14146 1524 aaKnown RBP21.34■■□□□ 1.01
NUB1-202ENST00000460712 DNMBPQ6XZF7 1577 aa21.31■■□□□ 1
NUB1-202ENST00000460712 TOPBP1Q92547 1522 aa21.28■■□□□ 1
NUB1-202ENST00000460712 CUX1P39880 1505 aa21.17■□□□□ 0.98
NUB1-202ENST00000460712 IFT140Q96RY7 1462 aa21.13■□□□□ 0.97
NUB1-202ENST00000460712 WRNQ14191 1432 aaPredicted RBP eCLIP21.13■□□□□ 0.97
NUB1-202ENST00000460712 POLA1P09884 1462 aaPredicted RBP21.11■□□□□ 0.97
NUB1-202ENST00000460712 BIVM-ERCC5R4GMW8 1640 aa21.09■□□□□ 0.97
NUB1-202ENST00000460712 FGD5Q6ZNL6 1462 aa21.08■□□□□ 0.97
NUB1-202ENST00000460712 TOP2BQ02880 1626 aa21.08■□□□□ 0.97
NUB1-202ENST00000460712 SYNJ1O43426 1573 aa21.05■□□□□ 0.96
NUB1-202ENST00000460712 TARBP1Q13395 1621 aaKnown RBP21.04■□□□□ 0.96
NUB1-202ENST00000460712 SOGA1O94964 1423 aa21.02■□□□□ 0.96
NUB1-202ENST00000460712 WDR97A6NE52 1622 aa20.99■□□□□ 0.95
NUB1-202ENST00000460712 RAD54L2Q9Y4B4 1467 aa20.96■□□□□ 0.95
NUB1-202ENST00000460712 ZNF608Q9ULD9 1512 aaPredicted RBP20.94■□□□□ 0.94
NUB1-202ENST00000460712 EIF4G3O43432 1585 aaKnown RBP20.93■□□□□ 0.94
NUB1-202ENST00000460712 ABCA10Q8WWZ4 1543 aa20.92■□□□□ 0.94
NUB1-202ENST00000460712 AQRO60306 1485 aaKnown RBP eCLIP20.84■□□□□ 0.93
NUB1-202ENST00000460712 TDRD9Q8NDG6 1382 aaKnown RBP20.83■□□□□ 0.92
NUB1-202ENST00000460712 ABCA5Q8WWZ7 1642 aa20.82■□□□□ 0.92
NUB1-202ENST00000460712 GAPVD1Q14C86 1478 aa20.8■□□□□ 0.92
NUB1-202ENST00000460712 GRIN2BQ13224 1484 aa20.78■□□□□ 0.92
NUB1-202ENST00000460712 PBRM1Q86U86 1689 aa20.76■□□□□ 0.91
NUB1-202ENST00000460712 TRIM41Q8WV44 630 aa20.73■□□□□ 0.91
NUB1-202ENST00000460712 MAGI1Q96QZ7 1491 aaPredicted RBP20.73■□□□□ 0.91
NUB1-202ENST00000460712 KIF27Q86VH2 1401 aa20.7■□□□□ 0.9
NUB1-202ENST00000460712 SNAPC4Q5SXM2 1469 aa20.69■□□□□ 0.9
NUB1-202ENST00000460712 ERICH3Q5RHP9 1530 aa20.69■□□□□ 0.9
NUB1-202ENST00000460712 SYNJ2O15056 1496 aa20.62■□□□□ 0.89
NUB1-202ENST00000460712 ADAMTS12P58397 1594 aa20.61■□□□□ 0.89
NUB1-202ENST00000460712 CHD1O14646 1710 aa20.61■□□□□ 0.89
NUB1-202ENST00000460712 OSCARQ8IYS5 282 aa20.58■□□□□ 0.89
NUB1-202ENST00000460712 FHAD1B1AJZ9 1412 aa20.58■□□□□ 0.88
NUB1-202ENST00000460712 CHIC1Q5VXU3 224 aa20.57■□□□□ 0.88
NUB1-202ENST00000460712 CHMP7Q8WUX9 453 aaPredicted RBP20.56■□□□□ 0.88
NUB1-202ENST00000460712 CUL7Q14999 1698 aa20.56■□□□□ 0.88
NUB1-202ENST00000460712 FBLN2P98095 1184 aa20.54■□□□□ 0.88
NUB1-202ENST00000460712 IGF1RP08069 1367 aa20.53■□□□□ 0.88
NUB1-202ENST00000460712 DNAJC5Q9H3Z4 198 aa20.51■□□□□ 0.87
NUB1-202ENST00000460712 GRIN2AQ12879 1464 aa20.5■□□□□ 0.87
NUB1-202ENST00000460712 EEA1Q15075 1411 aa20.48■□□□□ 0.87
NUB1-202ENST00000460712 RUSC2Q8N2Y8 1516 aa20.45■□□□□ 0.86
NUB1-202ENST00000460712 CARMIL1Q5VZK9 1371 aa20.44■□□□□ 0.86
NUB1-202ENST00000460712 NUP160Q12769 1436 aa20.41■□□□□ 0.86
NUB1-202ENST00000460712 CLASP1Q7Z460 1538 aa20.41■□□□□ 0.86
NUB1-202ENST00000460712 CEP170Q5SW79 1584 aa20.37■□□□□ 0.85
NUB1-202ENST00000460712 RAPGEF2Q9Y4G8 1499 aa20.37■□□□□ 0.85
NUB1-202ENST00000460712 CSRNP3Q8WYN3 585 aa20.33■□□□□ 0.85
NUB1-202ENST00000460712 PRXQ9BXM0 1461 aa20.32■□□□□ 0.84
NUB1-202ENST00000460712 KIAA0586Q9BVV6 1533 aa20.27■□□□□ 0.83
NUB1-202ENST00000460712 ARHGEF11O15085 1522 aa20.25■□□□□ 0.83
NUB1-202ENST00000460712 SHROOM2Q13796 1616 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 211.9 ms