Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN1P07384 HAUS4P1-201ENST00000406739 1145 ntBASIC15.75■□□□□ 0.11
CAPN1P07384 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN1P07384 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.75■□□□□ 0.11
CAPN1P07384 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.75■□□□□ 0.11
CAPN1P07384 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.75■□□□□ 0.11
CAPN1P07384 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.75■□□□□ 0.11
CAPN1P07384 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN1P07384 AL390955.2-201ENST00000603032 514 ntBASIC15.75■□□□□ 0.11
CAPN1P07384 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.75■□□□□ 0.11
CAPN1P07384 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN1P07384 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN1P07384 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
CAPN1P07384 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN1P07384 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN1P07384 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
CAPN1P07384 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CAPN1P07384 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN1P07384 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN1P07384 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN1P07384 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.75■□□□□ 0.11
CAPN1P07384 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
CAPN1P07384 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.75■□□□□ 0.11
CAPN1P07384 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN1P07384 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.75■□□□□ 0.11
CAPN1P07384 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN1P07384 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN1P07384 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CAPN1P07384 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
CAPN1P07384 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN1P07384 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.74■□□□□ 0.11
CAPN1P07384 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN1P07384 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN1P07384 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN1P07384 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN1P07384 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CAPN1P07384 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.74■□□□□ 0.11
CAPN1P07384 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN1P07384 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN1P07384 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.74■□□□□ 0.11
CAPN1P07384 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.74■□□□□ 0.11
CAPN1P07384 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN1P07384 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
CAPN1P07384 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN1P07384 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN1P07384 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CAPN1P07384 FAM8A3P-201ENST00000427218 844 ntBASIC15.74■□□□□ 0.11
CAPN1P07384 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.74■□□□□ 0.11
CAPN1P07384 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.74■□□□□ 0.11
CAPN1P07384 FAM86GP-201ENST00000448322 971 ntBASIC15.74■□□□□ 0.11
CAPN1P07384 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN1P07384 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.74■□□□□ 0.11
CAPN1P07384 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.74■□□□□ 0.11
CAPN1P07384 AC069262.1-201ENST00000539058 672 ntBASIC15.74■□□□□ 0.11
CAPN1P07384 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.74■□□□□ 0.11
CAPN1P07384 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.74■□□□□ 0.11
CAPN1P07384 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.74■□□□□ 0.11
CAPN1P07384 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN1P07384 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN1P07384 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN1P07384 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN1P07384 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN1P07384 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN1P07384 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN1P07384 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN1P07384 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.74■□□□□ 0.11
CAPN1P07384 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CAPN1P07384 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN1P07384 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.74■□□□□ 0.11
CAPN1P07384 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.73■□□□□ 0.11
CAPN1P07384 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN1P07384 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN1P07384 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.73■□□□□ 0.11
CAPN1P07384 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN1P07384 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN1P07384 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN1P07384 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN1P07384 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN1P07384 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.73■□□□□ 0.11
CAPN1P07384 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN1P07384 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN1P07384 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN1P07384 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CAPN1P07384 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN1P07384 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN1P07384 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.73■□□□□ 0.11
CAPN1P07384 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN1P07384 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN1P07384 MIR346-201ENST00000362234 95 ntBASIC15.73■□□□□ 0.11
CAPN1P07384 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
CAPN1P07384 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.73■□□□□ 0.11
CAPN1P07384 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN1P07384 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.73■□□□□ 0.11
CAPN1P07384 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
CAPN1P07384 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN1P07384 RBPMS2P1-201ENST00000437762 623 ntBASIC15.73■□□□□ 0.11
CAPN1P07384 BCRP1-201ENST00000444246 691 ntBASIC15.73■□□□□ 0.11
CAPN1P07384 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.73■□□□□ 0.11
CAPN1P07384 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN1P07384 IGHV3-62-201ENST00000520057 340 ntBASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms