Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 SLC25A25-204ENST00000373069 3376 ntTSL 5 BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 TUBB8P12-201ENST00000308911 1335 ntBASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 TUBB7P-202ENST00000428444 1305 ntBASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 TUBB8P7-204ENST00000567960 1332 ntBASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 GBP1P1-201ENST00000394662 1740 ntBASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 AC113367.3-201ENST00000508316 1912 ntBASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 SDHAP2-201ENST00000455183 2001 ntBASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 AC023090.2-201ENST00000625182 2110 ntBASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 CCDC148-201ENST00000283233 3122 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 BDNF-218ENST00000533246 4000 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 GEMIN5-201ENST00000285873 5397 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 ABCA8-208ENST00000586539 5088 ntAPPRIS P4 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 GOLGA8VP-201ENST00000559009 1798 ntBASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 POM121L14P-201ENST00000406100 1558 ntBASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 AC105265.2-201ENST00000467189 838 ntBASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 CDV3P1-201ENST00000471403 739 ntBASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 AC023632.3-201ENST00000521633 145 ntBASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 GAB2-201ENST00000340149 6052 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 AMBRA1-212ENST00000534300 5067 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 RAP1A-202ENST00000369709 5024 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 ERBB2-201ENST00000269571 4545 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 ALDH1L1-202ENST00000393431 2797 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 DOCK3-201ENST00000266037 8755 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 PCDH12-201ENST00000231484 6562 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 PAM-203ENST00000346918 3302 ntTSL 5 BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC8.03□□□□□ -1.12
CDC42SE1Q9NRR8 PCDHGA9-201ENST00000573521 4605 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.12
CDC42SE1Q9NRR8 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.12
CDC42SE1Q9NRR8 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
CDC42SE1Q9NRR8 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
CDC42SE1Q9NRR8 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC8.02□□□□□ -1.12
CDC42SE1Q9NRR8 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.12
CDC42SE1Q9NRR8 SLC45A2-202ENST00000382102 2723 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
CDC42SE1Q9NRR8 LINC00656-201ENST00000443744 1896 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
CDC42SE1Q9NRR8 AC008806.1-201ENST00000624962 2443 ntBASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 DDR1-262ENST00000508312 3073 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 TMPRSS7-201ENST00000419127 2317 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 ARHGEF10-203ENST00000398560 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms