RNA–Protein interactions for RNA: ENST00000231484.3

PCDH12-201, Transcript of protocadherin 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH12, Length 6,562 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH12-201ENST00000231484 DCAF8L2P0C7V8 631 aa19.28■□□□□ 0.68
PCDH12-201ENST00000231484 PELP1Q8IZL8 1130 aaKnown RBP19.2■□□□□ 0.66
PCDH12-201ENST00000231484 MYT1Q01538 1121 aa19.16■□□□□ 0.66
PCDH12-201ENST00000231484 SUPT5HO00267 1087 aaKnown RBP18.45■□□□□ 0.54
PCDH12-201ENST00000231484 CENPBP07199 599 aaPredicted RBP18.45■□□□□ 0.54
PCDH12-201ENST00000231484 ERICH6Q7L0X2 663 aa18.43■□□□□ 0.54
PCDH12-201ENST00000231484 EHMT2Q96KQ7 1210 aa18.27■□□□□ 0.52
PCDH12-201ENST00000231484 CCER1Q8TC90 406 aaPredicted RBP18.24■□□□□ 0.51
PCDH12-201ENST00000231484 PCGF6Q9BYE7 350 aa18.23■□□□□ 0.51
PCDH12-201ENST00000231484 ZEB1P37275 1124 aaPredicted RBP18.17■□□□□ 0.5
PCDH12-201ENST00000231484 SHROOM4Q9ULL8 1493 aa18.03■□□□□ 0.48
PCDH12-201ENST00000231484 TTBK1Q5TCY1 1321 aaPredicted RBP17.76■□□□□ 0.43
PCDH12-201ENST00000231484 NEFLP07196 543 aa17.76■□□□□ 0.43
PCDH12-201ENST00000231484 HRCP23327 699 aa17.75■□□□□ 0.43
PCDH12-201ENST00000231484 YTHDC1Q96MU7 727 aaKnown RBP17.74■□□□□ 0.43
PCDH12-201ENST00000231484 APLP2Q06481 763 aa17.68■□□□□ 0.42
PCDH12-201ENST00000231484 NISCHQ9Y2I1 1504 aa17.56■□□□□ 0.4
PCDH12-201ENST00000231484 FAM9AQ8IZU1 332 aaPredicted RBP17.46■□□□□ 0.39
PCDH12-201ENST00000231484 TRIM26Q12899 539 aaPredicted RBP17.35■□□□□ 0.37
PCDH12-201ENST00000231484 RANGAP1P46060 587 aaPredicted RBP17.31■□□□□ 0.36
PCDH12-201ENST00000231484 DAXXQ9UER7 740 aaPredicted RBP17.26■□□□□ 0.35
PCDH12-201ENST00000231484 PPARGC1BQ86YN6 1023 aaKnown RBP17.26■□□□□ 0.35
PCDH12-201ENST00000231484 RTL5Q5HYW3 569 aaPredicted RBP17.25■□□□□ 0.35
PCDH12-201ENST00000231484 GTF3C3Q9Y5Q9 886 aa17.13■□□□□ 0.33
PCDH12-201ENST00000231484 ATP1B4Q9UN42 357 aaPredicted RBP17.06■□□□□ 0.32
PCDH12-201ENST00000231484 TRIM41Q8WV44 630 aa17.05■□□□□ 0.32
PCDH12-201ENST00000231484 DIEXFQ68CQ4 756 aaKnown RBP17.03■□□□□ 0.32
PCDH12-201ENST00000231484 ZNF316A6NFI3 1004 aaPredicted RBP16.9■□□□□ 0.3
PCDH12-201ENST00000231484 ACIN1Q9UKV3 1341 aaKnown RBP16.89■□□□□ 0.29
PCDH12-201ENST00000231484 UBTFP17480 764 aaKnown RBP16.79■□□□□ 0.28
PCDH12-201ENST00000231484 BCANQ96GW7 911 aa16.76■□□□□ 0.27
PCDH12-201ENST00000231484 CDK11AQ9UQ88 783 aaPredicted RBP16.76■□□□□ 0.27
PCDH12-201ENST00000231484 GLIPR1L2Q4G1C9 344 aa16.73■□□□□ 0.27
PCDH12-201ENST00000231484 EIF5BO60841 1220 aaKnown RBP16.73■□□□□ 0.27
PCDH12-201ENST00000231484 MYT1LQ9UL68 1186 aa16.67■□□□□ 0.26
PCDH12-201ENST00000231484 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.67■□□□□ 0.26
PCDH12-201ENST00000231484 LOC105371045A0A1W2PR82 267 aa16.62■□□□□ 0.25
PCDH12-201ENST00000231484 CLSPNQ9HAW4 1339 aa16.57■□□□□ 0.24
PCDH12-201ENST00000231484 CHIC1Q5VXU3 224 aa16.55■□□□□ 0.24
PCDH12-201ENST00000231484 POLR3GLQ9BT43 218 aa16.54■□□□□ 0.24
PCDH12-201ENST00000231484 SCAF1Q9H7N4 1312 aaKnown RBP16.53■□□□□ 0.24
PCDH12-201ENST00000231484 HNRNPUL2Q1KMD3 747 aaKnown RBP16.53■□□□□ 0.24
PCDH12-201ENST00000231484 CNGB1Q14028 1251 aaPredicted RBP16.53■□□□□ 0.24
PCDH12-201ENST00000231484 ANP32AP39687 249 aaKnown RBP16.51■□□□□ 0.23
PCDH12-201ENST00000231484 ITGAEP38570 1179 aa16.49■□□□□ 0.23
PCDH12-201ENST00000231484 NEUROD1Q13562 356 aa16.37■□□□□ 0.21
PCDH12-201ENST00000231484 ANP32EQ9BTT0 268 aa16.35■□□□□ 0.21
PCDH12-201ENST00000231484 ANP32CO43423 234 aa16.35■□□□□ 0.21
PCDH12-201ENST00000231484 BCL11AQ9H165 835 aa16.28■□□□□ 0.2
PCDH12-201ENST00000231484 FKBP8Q14318 412 aa16.28■□□□□ 0.2
PCDH12-201ENST00000231484 NBR1Q14596 966 aa16.26■□□□□ 0.19
PCDH12-201ENST00000231484 NPM2Q86SE8 214 aaKnown RBP16.25■□□□□ 0.19
PCDH12-201ENST00000231484 ANP32BQ92688 251 aaKnown RBP16.2■□□□□ 0.18
PCDH12-201ENST00000231484 SLC4A1APQ9BWU0 796 aaKnown RBP16.19■□□□□ 0.18
PCDH12-201ENST00000231484 ZBTB47Q9UFB7 747 aaPredicted RBP16.15■□□□□ 0.18
PCDH12-201ENST00000231484 DCAF1Q9Y4B6 1507 aa15.96■□□□□ 0.15
PCDH12-201ENST00000231484 CANXP27824 592 aaKnown RBP15.95■□□□□ 0.14
PCDH12-201ENST00000231484 TNNT2P45379 298 aaPredicted RBP15.95■□□□□ 0.14
PCDH12-201ENST00000231484 FAM50AQ14320 339 aaKnown RBP15.91■□□□□ 0.14
PCDH12-201ENST00000231484 UPF2Q9HAU5 1272 aaKnown RBP15.89■□□□□ 0.13
PCDH12-201ENST00000231484 RTN4Q9NQC3 1192 aaKnown RBP15.89■□□□□ 0.13
PCDH12-201ENST00000231484 ARXQ96QS3 562 aa15.89■□□□□ 0.13
PCDH12-201ENST00000231484 HNRNPUQ00839 825 aaKnown RBP eCLIP15.88■□□□□ 0.13
PCDH12-201ENST00000231484 ERICH6BQ5W0A0 696 aa15.88■□□□□ 0.13
PCDH12-201ENST00000231484 CCDC136Q96JN2 1154 aa15.87■□□□□ 0.13
PCDH12-201ENST00000231484 HSP90AA1P07900 732 aaKnown RBP15.86■□□□□ 0.13
PCDH12-201ENST00000231484 MIER1Q8N108 512 aa15.85■□□□□ 0.13
PCDH12-201ENST00000231484 TRIM52Q96A61 297 aa15.84■□□□□ 0.13
PCDH12-201ENST00000231484 NEFMP07197 916 aa15.84■□□□□ 0.13
PCDH12-201ENST00000231484 DDRGK1Q96HY6 314 aa15.82■□□□□ 0.12
PCDH12-201ENST00000231484 TRIM44Q96DX7 344 aaPredicted RBP15.81■□□□□ 0.12
PCDH12-201ENST00000231484 NAP1L5Q96NT1 182 aaPredicted RBP15.81■□□□□ 0.12
PCDH12-201ENST00000231484 ZNF326Q5BKZ1 582 aaKnown RBP15.78■□□□□ 0.12
PCDH12-201ENST00000231484 DEKP35659 375 aaKnown RBP15.78■□□□□ 0.12
PCDH12-201ENST00000231484 PPM1GO15355 546 aaPredicted RBP15.76■□□□□ 0.11
PCDH12-201ENST00000231484 NOP58Q9Y2X3 529 aaKnown RBP15.73■□□□□ 0.11
PCDH12-201ENST00000231484 DDX10Q13206 875 aaKnown RBP15.72■□□□□ 0.11
PCDH12-201ENST00000231484 CDK11BP21127 795 aaKnown RBP15.72■□□□□ 0.11
PCDH12-201ENST00000231484 IRX6P78412 446 aaPredicted RBP15.72■□□□□ 0.11
PCDH12-201ENST00000231484 SLC24A1O60721 1099 aa15.7■□□□□ 0.1
PCDH12-201ENST00000231484 FAM9BQ8IZU0 186 aa15.69■□□□□ 0.1
PCDH12-201ENST00000231484 SUPT16HQ9Y5B9 1047 aaKnown RBP15.69■□□□□ 0.1
PCDH12-201ENST00000231484 CSRNP3Q8WYN3 585 aa15.68■□□□□ 0.1
PCDH12-201ENST00000231484 BECN1Q14457 450 aa15.65■□□□□ 0.1
PCDH12-201ENST00000231484 NCLP19338 710 aaKnown RBP15.61■□□□□ 0.09
PCDH12-201ENST00000231484 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.59■□□□□ 0.09
PCDH12-201ENST00000231484 LAS1LQ9Y4W2 734 aaKnown RBP15.59■□□□□ 0.09
PCDH12-201ENST00000231484 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.59■□□□□ 0.09
PCDH12-201ENST00000231484 CCDC180Q9P1Z9 1646 aa15.55■□□□□ 0.08
PCDH12-201ENST00000231484 RBM19Q9Y4C8 960 aaKnown RBP15.55■□□□□ 0.08
PCDH12-201ENST00000231484 ARID3CA6NKF2 412 aa15.55■□□□□ 0.08
PCDH12-201ENST00000231484 TONSLQ96HA7 1378 aa15.55■□□□□ 0.08
PCDH12-201ENST00000231484 GOLGA6L22H0YM25 854 aa15.53■□□□□ 0.08
PCDH12-201ENST00000231484 DNTTIP2Q5QJE6 756 aaKnown RBP15.53■□□□□ 0.08
PCDH12-201ENST00000231484 MRS2Q9HD23 443 aa15.51■□□□□ 0.07
PCDH12-201ENST00000231484 PPP4R2Q9NY27 417 aa15.51■□□□□ 0.07
PCDH12-201ENST00000231484 PABPN1Q86U42 306 aaKnown RBP eCLIP15.51■□□□□ 0.07
PCDH12-201ENST00000231484 PTMAP06454 111 aaKnown RBP15.5■□□□□ 0.07
PCDH12-201ENST00000231484 L1TD1Q5T7N2 865 aaKnown RBP15.48■□□□□ 0.07
PCDH12-201ENST00000231484 FBLN2P98095 1184 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms