RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 NISCHQ9Y2I1 1504 aa21.22■□□□□ 0.99
PCDHGA9-201ENST00000573521 DCAF8L2P0C7V8 631 aa20.38■□□□□ 0.85
PCDHGA9-201ENST00000573521 SUPT5HO00267 1087 aaKnown RBP19.88■□□□□ 0.77
PCDHGA9-201ENST00000573521 PELP1Q8IZL8 1130 aaKnown RBP19.72■□□□□ 0.75
PCDHGA9-201ENST00000573521 ZEB1P37275 1124 aaPredicted RBP19.39■□□□□ 0.69
PCDHGA9-201ENST00000573521 SHROOM4Q9ULL8 1493 aa19.38■□□□□ 0.69
PCDHGA9-201ENST00000573521 APLP2Q06481 763 aa19.2■□□□□ 0.66
PCDHGA9-201ENST00000573521 MYT1Q01538 1121 aa19.11■□□□□ 0.65
PCDHGA9-201ENST00000573521 CENPBP07199 599 aaPredicted RBP19.04■□□□□ 0.64
PCDHGA9-201ENST00000573521 PCGF6Q9BYE7 350 aa18.89■□□□□ 0.61
PCDHGA9-201ENST00000573521 FAM9AQ8IZU1 332 aaPredicted RBP18.87■□□□□ 0.61
PCDHGA9-201ENST00000573521 CCER1Q8TC90 406 aaPredicted RBP18.78■□□□□ 0.6
PCDHGA9-201ENST00000573521 TRIM41Q8WV44 630 aa18.76■□□□□ 0.59
PCDHGA9-201ENST00000573521 TRIM26Q12899 539 aaPredicted RBP18.59■□□□□ 0.57
PCDHGA9-201ENST00000573521 EHMT2Q96KQ7 1210 aa18.51■□□□□ 0.55
PCDHGA9-201ENST00000573521 HRCP23327 699 aa18.5■□□□□ 0.55
PCDHGA9-201ENST00000573521 ERICH6Q7L0X2 663 aa18.44■□□□□ 0.54
PCDHGA9-201ENST00000573521 NEFLP07196 543 aa18.39■□□□□ 0.53
PCDHGA9-201ENST00000573521 UBTFP17480 764 aaKnown RBP18.34■□□□□ 0.53
PCDHGA9-201ENST00000573521 CHIC1Q5VXU3 224 aa18.25■□□□□ 0.51
PCDHGA9-201ENST00000573521 CCDC180Q9P1Z9 1646 aa18.13■□□□□ 0.49
PCDHGA9-201ENST00000573521 ABCC9O60706 1549 aa18.08■□□□□ 0.48
PCDHGA9-201ENST00000573521 TTBK1Q5TCY1 1321 aaPredicted RBP18.05■□□□□ 0.48
PCDHGA9-201ENST00000573521 ATP1B4Q9UN42 357 aaPredicted RBP17.88■□□□□ 0.45
PCDHGA9-201ENST00000573521 YTHDC1Q96MU7 727 aaKnown RBP17.83■□□□□ 0.45
PCDHGA9-201ENST00000573521 RANGAP1P46060 587 aaPredicted RBP17.83■□□□□ 0.44
PCDHGA9-201ENST00000573521 LOC105371045A0A1W2PR82 267 aa17.76■□□□□ 0.43
PCDHGA9-201ENST00000573521 CLSPNQ9HAW4 1339 aa17.75■□□□□ 0.43
PCDHGA9-201ENST00000573521 DIEXFQ68CQ4 756 aaKnown RBP17.75■□□□□ 0.43
PCDHGA9-201ENST00000573521 DAXXQ9UER7 740 aaPredicted RBP17.7■□□□□ 0.42
PCDHGA9-201ENST00000573521 DCAF1Q9Y4B6 1507 aa17.64■□□□□ 0.41
PCDHGA9-201ENST00000573521 ZCCHC6Q5VYS8 1495 aaKnown RBP17.64■□□□□ 0.41
PCDHGA9-201ENST00000573521 HNRNPUL2Q1KMD3 747 aaKnown RBP17.58■□□□□ 0.41
PCDHGA9-201ENST00000573521 PPARGC1BQ86YN6 1023 aaKnown RBP17.56■□□□□ 0.4
PCDHGA9-201ENST00000573521 ZNF316A6NFI3 1004 aaPredicted RBP17.49■□□□□ 0.39
PCDHGA9-201ENST00000573521 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.48■□□□□ 0.39
PCDHGA9-201ENST00000573521 RTL5Q5HYW3 569 aaPredicted RBP17.47■□□□□ 0.39
PCDHGA9-201ENST00000573521 PABPN1Q86U42 306 aaKnown RBP eCLIP17.42■□□□□ 0.38
PCDHGA9-201ENST00000573521 ITGAEP38570 1179 aa17.42■□□□□ 0.38
PCDHGA9-201ENST00000573521 RB1CC1Q8TDY2 1594 aa17.41■□□□□ 0.38
PCDHGA9-201ENST00000573521 NACADO15069 1562 aa17.38■□□□□ 0.37
PCDHGA9-201ENST00000573521 ANP32CO43423 234 aa17.38■□□□□ 0.37
PCDHGA9-201ENST00000573521 ACIN1Q9UKV3 1341 aaKnown RBP17.37■□□□□ 0.37
PCDHGA9-201ENST00000573521 CSRNP3Q8WYN3 585 aa17.35■□□□□ 0.37
PCDHGA9-201ENST00000573521 GTF3C3Q9Y5Q9 886 aa17.32■□□□□ 0.36
PCDHGA9-201ENST00000573521 MYT1LQ9UL68 1186 aa17.31■□□□□ 0.36
PCDHGA9-201ENST00000573521 CDK11AQ9UQ88 783 aaPredicted RBP17.3■□□□□ 0.36
PCDHGA9-201ENST00000573521 FAM50AQ14320 339 aaKnown RBP17.25■□□□□ 0.35
PCDHGA9-201ENST00000573521 EEA1Q15075 1411 aa17.21■□□□□ 0.35
PCDHGA9-201ENST00000573521 POLR3GLQ9BT43 218 aa17.2■□□□□ 0.34
PCDHGA9-201ENST00000573521 SCRIBQ14160 1630 aa17.2■□□□□ 0.34
PCDHGA9-201ENST00000573521 TRIM52Q96A61 297 aa17.14■□□□□ 0.33
PCDHGA9-201ENST00000573521 MYO15BQ96JP2 1530 aa17.06■□□□□ 0.32
PCDHGA9-201ENST00000573521 NEUROD1Q13562 356 aa17.05■□□□□ 0.32
PCDHGA9-201ENST00000573521 ANP32AP39687 249 aaKnown RBP17.02■□□□□ 0.32
PCDHGA9-201ENST00000573521 TONSLQ96HA7 1378 aa16.95■□□□□ 0.3
PCDHGA9-201ENST00000573521 ZBTB47Q9UFB7 747 aaPredicted RBP16.92■□□□□ 0.3
PCDHGA9-201ENST00000573521 GOLGA3Q08378 1498 aa16.85■□□□□ 0.29
PCDHGA9-201ENST00000573521 NEFMP07197 916 aa16.84■□□□□ 0.29
PCDHGA9-201ENST00000573521 BCANQ96GW7 911 aa16.83■□□□□ 0.28
PCDHGA9-201ENST00000573521 CLIP1P30622 1438 aa16.81■□□□□ 0.28
PCDHGA9-201ENST00000573521 SLC4A1APQ9BWU0 796 aaKnown RBP16.8■□□□□ 0.28
PCDHGA9-201ENST00000573521 TNIKQ9UKE5 1360 aa16.8■□□□□ 0.28
PCDHGA9-201ENST00000573521 RSF1Q96T23 1441 aaPredicted RBP16.78■□□□□ 0.28
PCDHGA9-201ENST00000573521 CANXP27824 592 aaKnown RBP16.76■□□□□ 0.27
PCDHGA9-201ENST00000573521 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.75■□□□□ 0.27
PCDHGA9-201ENST00000573521 FKBP8Q14318 412 aa16.74■□□□□ 0.27
PCDHGA9-201ENST00000573521 CNGB1Q14028 1251 aaPredicted RBP16.73■□□□□ 0.27
PCDHGA9-201ENST00000573521 UPF2Q9HAU5 1272 aaKnown RBP16.73■□□□□ 0.27
PCDHGA9-201ENST00000573521 TIMELESSQ9UNS1 1208 aa16.72■□□□□ 0.27
PCDHGA9-201ENST00000573521 CEP164Q9UPV0 1460 aa16.72■□□□□ 0.27
PCDHGA9-201ENST00000573521 ZNF326Q5BKZ1 582 aaKnown RBP16.71■□□□□ 0.27
PCDHGA9-201ENST00000573521 CEP162Q5TB80 1403 aa16.7■□□□□ 0.26
PCDHGA9-201ENST00000573521 ANP32BQ92688 251 aaKnown RBP16.69■□□□□ 0.26
PCDHGA9-201ENST00000573521 HNRNPUQ00839 825 aaKnown RBP eCLIP16.69■□□□□ 0.26
PCDHGA9-201ENST00000573521 BAZ1AQ9NRL2 1556 aaPredicted RBP16.65■□□□□ 0.26
PCDHGA9-201ENST00000573521 ANP32EQ9BTT0 268 aa16.63■□□□□ 0.25
PCDHGA9-201ENST00000573521 MTUS2Q5JR59 1369 aa16.62■□□□□ 0.25
PCDHGA9-201ENST00000573521 DDX10Q13206 875 aaKnown RBP16.62■□□□□ 0.25
PCDHGA9-201ENST00000573521 GLIPR1L2Q4G1C9 344 aa16.62■□□□□ 0.25
PCDHGA9-201ENST00000573521 WRNQ14191 1432 aaPredicted RBP eCLIP16.61■□□□□ 0.25
PCDHGA9-201ENST00000573521 EIF5BO60841 1220 aaKnown RBP16.61■□□□□ 0.25
PCDHGA9-201ENST00000573521 SCAF1Q9H7N4 1312 aaKnown RBP16.61■□□□□ 0.25
PCDHGA9-201ENST00000573521 EIF4G2P78344 907 aaKnown RBP eCLIP16.6■□□□□ 0.25
PCDHGA9-201ENST00000573521 CCDC136Q96JN2 1154 aa16.59■□□□□ 0.25
PCDHGA9-201ENST00000573521 TMC1Q8TDI8 760 aa16.58■□□□□ 0.25
PCDHGA9-201ENST00000573521 DDRGK1Q96HY6 314 aa16.58■□□□□ 0.24
PCDHGA9-201ENST00000573521 KIF27Q86VH2 1401 aa16.57■□□□□ 0.24
PCDHGA9-201ENST00000573521 P3H3Q8IVL6 736 aa16.55■□□□□ 0.24
PCDHGA9-201ENST00000573521 MIER1Q8N108 512 aa16.55■□□□□ 0.24
PCDHGA9-201ENST00000573521 BAZ1BQ9UIG0 1483 aaKnown RBP16.54■□□□□ 0.24
PCDHGA9-201ENST00000573521 TSPY4P0CV99 314 aa16.52■□□□□ 0.24
PCDHGA9-201ENST00000573521 TSPY10P0CW01 314 aa16.52■□□□□ 0.24
PCDHGA9-201ENST00000573521 MRS2Q9HD23 443 aa16.52■□□□□ 0.24
PCDHGA9-201ENST00000573521 ERICH6BQ5W0A0 696 aa16.5■□□□□ 0.23
PCDHGA9-201ENST00000573521 CECR2Q9BXF3 1484 aa16.5■□□□□ 0.23
PCDHGA9-201ENST00000573521 FHAD1B1AJZ9 1412 aa16.49■□□□□ 0.23
PCDHGA9-201ENST00000573521 SLC24A1O60721 1099 aa16.49■□□□□ 0.23
PCDHGA9-201ENST00000573521 CDCA8Q53HL2 280 aa16.47■□□□□ 0.23
PCDHGA9-201ENST00000573521 FAM9BQ8IZU0 186 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms