RNA–Protein interactions for RNA: ENST00000369709.3

RAP1A-202, Transcript of RAP1A, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1A, Length 5,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1A-202ENST00000369709 NISCHQ9Y2I1 1504 aa20.9■□□□□ 0.94
RAP1A-202ENST00000369709 SUPT5HO00267 1087 aaKnown RBP20.51■□□□□ 0.87
RAP1A-202ENST00000369709 PCGF6Q9BYE7 350 aa20.34■□□□□ 0.85
RAP1A-202ENST00000369709 SHROOM4Q9ULL8 1493 aa20.24■□□□□ 0.83
RAP1A-202ENST00000369709 PELP1Q8IZL8 1130 aaKnown RBP20.2■□□□□ 0.82
RAP1A-202ENST00000369709 HRCP23327 699 aa20.14■□□□□ 0.81
RAP1A-202ENST00000369709 PPARGC1BQ86YN6 1023 aaKnown RBP20■□□□□ 0.79
RAP1A-202ENST00000369709 DCAF8L2P0C7V8 631 aa19.91■□□□□ 0.78
RAP1A-202ENST00000369709 MYT1Q01538 1121 aa19.63■□□□□ 0.73
RAP1A-202ENST00000369709 EHMT2Q96KQ7 1210 aa19.62■□□□□ 0.73
RAP1A-202ENST00000369709 ZEB1P37275 1124 aaPredicted RBP19.42■□□□□ 0.7
RAP1A-202ENST00000369709 CENPBP07199 599 aaPredicted RBP19.37■□□□□ 0.69
RAP1A-202ENST00000369709 TRIM26Q12899 539 aaPredicted RBP19.27■□□□□ 0.68
RAP1A-202ENST00000369709 FAM9AQ8IZU1 332 aaPredicted RBP19.22■□□□□ 0.67
RAP1A-202ENST00000369709 LOC105371045A0A1W2PR82 267 aa19.21■□□□□ 0.67
RAP1A-202ENST00000369709 CHIC1Q5VXU3 224 aa19.21■□□□□ 0.67
RAP1A-202ENST00000369709 YTHDC1Q96MU7 727 aaKnown RBP19.19■□□□□ 0.66
RAP1A-202ENST00000369709 CCER1Q8TC90 406 aaPredicted RBP19.11■□□□□ 0.65
RAP1A-202ENST00000369709 TTBK1Q5TCY1 1321 aaPredicted RBP19.11■□□□□ 0.65
RAP1A-202ENST00000369709 SCAF1Q9H7N4 1312 aaKnown RBP19.09■□□□□ 0.65
RAP1A-202ENST00000369709 GTF3C3Q9Y5Q9 886 aa19.01■□□□□ 0.63
RAP1A-202ENST00000369709 ACIN1Q9UKV3 1341 aaKnown RBP18.85■□□□□ 0.61
RAP1A-202ENST00000369709 DIEXFQ68CQ4 756 aaKnown RBP18.77■□□□□ 0.6
RAP1A-202ENST00000369709 TRIM41Q8WV44 630 aa18.77■□□□□ 0.6
RAP1A-202ENST00000369709 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.75■□□□□ 0.59
RAP1A-202ENST00000369709 NEUROD1Q13562 356 aa18.71■□□□□ 0.59
RAP1A-202ENST00000369709 MYO15BQ96JP2 1530 aa18.7■□□□□ 0.58
RAP1A-202ENST00000369709 ERICH6Q7L0X2 663 aa18.56■□□□□ 0.56
RAP1A-202ENST00000369709 DCAF1Q9Y4B6 1507 aa18.49■□□□□ 0.55
RAP1A-202ENST00000369709 APLP2Q06481 763 aa18.33■□□□□ 0.52
RAP1A-202ENST00000369709 NEFLP07196 543 aa18.27■□□□□ 0.52
RAP1A-202ENST00000369709 BCANQ96GW7 911 aa18.25■□□□□ 0.51
RAP1A-202ENST00000369709 RANGAP1P46060 587 aaPredicted RBP18.24■□□□□ 0.51
RAP1A-202ENST00000369709 ZNF316A6NFI3 1004 aaPredicted RBP18.21■□□□□ 0.51
RAP1A-202ENST00000369709 HNRNPUL2Q1KMD3 747 aaKnown RBP18.19■□□□□ 0.5
RAP1A-202ENST00000369709 UBTFP17480 764 aaKnown RBP18.16■□□□□ 0.5
RAP1A-202ENST00000369709 CCDC180Q9P1Z9 1646 aa18.14■□□□□ 0.49
RAP1A-202ENST00000369709 BCL11AQ9H165 835 aa18.03■□□□□ 0.48
RAP1A-202ENST00000369709 MIER1Q8N108 512 aa18■□□□□ 0.47
RAP1A-202ENST00000369709 ANP32EQ9BTT0 268 aa17.96■□□□□ 0.47
RAP1A-202ENST00000369709 ITGAEP38570 1179 aa17.79■□□□□ 0.44
RAP1A-202ENST00000369709 FKBP8Q14318 412 aa17.79■□□□□ 0.44
RAP1A-202ENST00000369709 SUPT16HQ9Y5B9 1047 aaKnown RBP17.71■□□□□ 0.43
RAP1A-202ENST00000369709 CLSPNQ9HAW4 1339 aa17.7■□□□□ 0.42
RAP1A-202ENST00000369709 CSRNP3Q8WYN3 585 aa17.69■□□□□ 0.42
RAP1A-202ENST00000369709 RTL5Q5HYW3 569 aaPredicted RBP17.66■□□□□ 0.42
RAP1A-202ENST00000369709 CDK11AQ9UQ88 783 aaPredicted RBP17.65■□□□□ 0.42
RAP1A-202ENST00000369709 ZCCHC6Q5VYS8 1495 aaKnown RBP17.6■□□□□ 0.41
RAP1A-202ENST00000369709 TSHZ2Q9NRE2 1034 aa17.56■□□□□ 0.4
RAP1A-202ENST00000369709 ATP1B4Q9UN42 357 aaPredicted RBP17.55■□□□□ 0.4
RAP1A-202ENST00000369709 NBR1Q14596 966 aa17.51■□□□□ 0.39
RAP1A-202ENST00000369709 CNGB1Q14028 1251 aaPredicted RBP17.49■□□□□ 0.39
RAP1A-202ENST00000369709 TRIM52Q96A61 297 aa17.47■□□□□ 0.39
RAP1A-202ENST00000369709 ANP32CO43423 234 aa17.44■□□□□ 0.38
RAP1A-202ENST00000369709 IRX6P78412 446 aaPredicted RBP17.42■□□□□ 0.38
RAP1A-202ENST00000369709 DDX10Q13206 875 aaKnown RBP17.39■□□□□ 0.37
RAP1A-202ENST00000369709 EIF5BO60841 1220 aaKnown RBP17.38■□□□□ 0.37
RAP1A-202ENST00000369709 RBM19Q9Y4C8 960 aaKnown RBP17.38■□□□□ 0.37
RAP1A-202ENST00000369709 DAXXQ9UER7 740 aaPredicted RBP17.33■□□□□ 0.37
RAP1A-202ENST00000369709 MYT1LQ9UL68 1186 aa17.3■□□□□ 0.36
RAP1A-202ENST00000369709 POLR3GLQ9BT43 218 aa17.29■□□□□ 0.36
RAP1A-202ENST00000369709 RTN4Q9NQC3 1192 aaKnown RBP17.27■□□□□ 0.36
RAP1A-202ENST00000369709 NPM2Q86SE8 214 aaKnown RBP17.26■□□□□ 0.35
RAP1A-202ENST00000369709 ANP32AP39687 249 aaKnown RBP17.26■□□□□ 0.35
RAP1A-202ENST00000369709 HNRNPUQ00839 825 aaKnown RBP eCLIP17.25■□□□□ 0.35
RAP1A-202ENST00000369709 DEKP35659 375 aaKnown RBP17.24■□□□□ 0.35
RAP1A-202ENST00000369709 HIRIP3Q9BW71 556 aaPredicted RBP17.24■□□□□ 0.35
RAP1A-202ENST00000369709 FAM50AQ14320 339 aaKnown RBP17.21■□□□□ 0.35
RAP1A-202ENST00000369709 CEP162Q5TB80 1403 aa17.19■□□□□ 0.34
RAP1A-202ENST00000369709 PRKCSHP14314 528 aaPredicted RBP17.11■□□□□ 0.33
RAP1A-202ENST00000369709 KCNH8Q96L42 1107 aa17.11■□□□□ 0.33
RAP1A-202ENST00000369709 ZBTB47Q9UFB7 747 aaPredicted RBP17.11■□□□□ 0.33
RAP1A-202ENST00000369709 RSF1Q96T23 1441 aaPredicted RBP17.09■□□□□ 0.33
RAP1A-202ENST00000369709 FAM9BQ8IZU0 186 aa17.05■□□□□ 0.32
RAP1A-202ENST00000369709 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.05■□□□□ 0.32
RAP1A-202ENST00000369709 CCDC136Q96JN2 1154 aa17.03■□□□□ 0.32
RAP1A-202ENST00000369709 NOP58Q9Y2X3 529 aaKnown RBP17.02■□□□□ 0.32
RAP1A-202ENST00000369709 SCRIBQ14160 1630 aa17.01■□□□□ 0.31
RAP1A-202ENST00000369709 B4GALNT3Q6L9W6 998 aa16.95■□□□□ 0.3
RAP1A-202ENST00000369709 LAS1LQ9Y4W2 734 aaKnown RBP16.92■□□□□ 0.3
RAP1A-202ENST00000369709 RB1CC1Q8TDY2 1594 aa16.92■□□□□ 0.3
RAP1A-202ENST00000369709 TNIKQ9UKE5 1360 aa16.91■□□□□ 0.3
RAP1A-202ENST00000369709 ANO8Q9HCE9 1232 aaPredicted RBP16.91■□□□□ 0.3
RAP1A-202ENST00000369709 CLIP1P30622 1438 aa16.91■□□□□ 0.3
RAP1A-202ENST00000369709 SENP3-EIF4A1A0A087X0R7 540 aa16.89■□□□□ 0.29
RAP1A-202ENST00000369709 PPP4R2Q9NY27 417 aa16.88■□□□□ 0.29
RAP1A-202ENST00000369709 TONSLQ96HA7 1378 aa16.85■□□□□ 0.29
RAP1A-202ENST00000369709 SIN3AQ96ST3 1273 aa16.85■□□□□ 0.29
RAP1A-202ENST00000369709 NEFMP07197 916 aa16.84■□□□□ 0.29
RAP1A-202ENST00000369709 MRS2Q9HD23 443 aa16.82■□□□□ 0.28
RAP1A-202ENST00000369709 ARXQ96QS3 562 aa16.82■□□□□ 0.28
RAP1A-202ENST00000369709 GLIPR1L2Q4G1C9 344 aa16.81■□□□□ 0.28
RAP1A-202ENST00000369709 GOLGA3Q08378 1498 aa16.8■□□□□ 0.28
RAP1A-202ENST00000369709 SOGA1O94964 1423 aa16.79■□□□□ 0.28
RAP1A-202ENST00000369709 ZNF326Q5BKZ1 582 aaKnown RBP16.78■□□□□ 0.28
RAP1A-202ENST00000369709 SALL2Q9Y467 1007 aaPredicted RBP16.77■□□□□ 0.28
RAP1A-202ENST00000369709 MSH5O43196 834 aa16.76■□□□□ 0.27
RAP1A-202ENST00000369709 FANCIQ9NVI1 1328 aa16.76■□□□□ 0.27
RAP1A-202ENST00000369709 P3H3Q8IVL6 736 aa16.75■□□□□ 0.27
RAP1A-202ENST00000369709 CCER2I3L3R5 266 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms