Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
DDX1Q92499 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
DDX1Q92499 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
DDX1Q92499 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
DDX1Q92499 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
DDX1Q92499 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
DDX1Q92499 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
DDX1Q92499 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
DDX1Q92499 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
DDX1Q92499 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
DDX1Q92499 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
DDX1Q92499 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
DDX1Q92499 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
DDX1Q92499 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
DDX1Q92499 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
DDX1Q92499 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
DDX1Q92499 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
DDX1Q92499 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
DDX1Q92499 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.94■□□□□ 0.3
DDX1Q92499 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
DDX1Q92499 NME2P1-201ENST00000426182 414 ntBASIC16.94■□□□□ 0.3
DDX1Q92499 ATP5G2P4-201ENST00000442175 420 ntBASIC16.94■□□□□ 0.3
DDX1Q92499 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.94■□□□□ 0.3
DDX1Q92499 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.94■□□□□ 0.3
DDX1Q92499 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.94■□□□□ 0.3
DDX1Q92499 AC125807.1-201ENST00000483097 614 ntBASIC16.94■□□□□ 0.3
DDX1Q92499 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.94■□□□□ 0.3
DDX1Q92499 AC140878.1-201ENST00000565277 250 ntBASIC16.94■□□□□ 0.3
DDX1Q92499 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
DDX1Q92499 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
DDX1Q92499 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
DDX1Q92499 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
DDX1Q92499 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.94■□□□□ 0.3
DDX1Q92499 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.94■□□□□ 0.3
DDX1Q92499 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.94■□□□□ 0.3
DDX1Q92499 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
DDX1Q92499 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.94■□□□□ 0.3
DDX1Q92499 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
DDX1Q92499 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
DDX1Q92499 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
DDX1Q92499 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
DDX1Q92499 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
DDX1Q92499 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
DDX1Q92499 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
DDX1Q92499 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.93■□□□□ 0.3
DDX1Q92499 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
DDX1Q92499 HYMAI-201ENST00000635591 3347 ntBASIC16.93■□□□□ 0.3
DDX1Q92499 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.93■□□□□ 0.3
DDX1Q92499 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
DDX1Q92499 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
DDX1Q92499 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
DDX1Q92499 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
DDX1Q92499 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.93■□□□□ 0.3
DDX1Q92499 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.93■□□□□ 0.3
DDX1Q92499 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
DDX1Q92499 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.93■□□□□ 0.3
DDX1Q92499 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.93■□□□□ 0.3
DDX1Q92499 AC136604.1-201ENST00000418535 575 ntBASIC16.93■□□□□ 0.3
DDX1Q92499 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.93■□□□□ 0.3
DDX1Q92499 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.93■□□□□ 0.3
DDX1Q92499 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.93■□□□□ 0.3
DDX1Q92499 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.93■□□□□ 0.3
DDX1Q92499 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.93■□□□□ 0.3
DDX1Q92499 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.93■□□□□ 0.3
DDX1Q92499 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.93■□□□□ 0.3
DDX1Q92499 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.93■□□□□ 0.3
DDX1Q92499 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.93■□□□□ 0.3
DDX1Q92499 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.93■□□□□ 0.3
DDX1Q92499 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
DDX1Q92499 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
DDX1Q92499 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
DDX1Q92499 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.93■□□□□ 0.3
DDX1Q92499 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
DDX1Q92499 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
DDX1Q92499 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
DDX1Q92499 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.93■□□□□ 0.3
DDX1Q92499 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.93■□□□□ 0.3
DDX1Q92499 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.93■□□□□ 0.3
DDX1Q92499 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
DDX1Q92499 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
DDX1Q92499 TMBIM7P-203ENST00000641617 1718 ntBASIC16.93■□□□□ 0.3
DDX1Q92499 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
DDX1Q92499 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.93■□□□□ 0.3
DDX1Q92499 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
DDX1Q92499 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
DDX1Q92499 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.92■□□□□ 0.3
DDX1Q92499 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
DDX1Q92499 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
DDX1Q92499 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
DDX1Q92499 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.92■□□□□ 0.3
DDX1Q92499 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
DDX1Q92499 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
DDX1Q92499 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
DDX1Q92499 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.92■□□□□ 0.3
DDX1Q92499 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.92■□□□□ 0.3
DDX1Q92499 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
DDX1Q92499 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
DDX1Q92499 MIR661-201ENST00000384842 89 ntBASIC16.92■□□□□ 0.3
DDX1Q92499 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
DDX1Q92499 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms