Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 MADD-204ENST00000395336 5942 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 GIMAP4-201ENST00000255945 2060 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 DUSP27-202ENST00000361200 4164 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 MIP-201ENST00000257979 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 SP1-201ENST00000327443 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 UBOX5-202ENST00000348031 4469 ntAPPRIS ALT1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 XRCC6-206ENST00000428575 2148 ntTSL 2 BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 TMCC2-208ENST00000545499 3339 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 LINC01015-203ENST00000434657 2874 ntTSL 2 BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 AP005117.1-202ENST00000581724 1908 ntBASIC9.74□□□□□ -0.85
SVIPQ8NHG7 FGD5P1-201ENST00000611158 3374 ntTSL 2 BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 PTPN1-201ENST00000371621 4008 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 MAP3K13-209ENST00000443863 3025 ntTSL 2 BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 INTS9-201ENST00000416984 2759 ntTSL 2 BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 TXNRD1-201ENST00000354940 4082 ntAPPRIS ALT1 TSL 5 BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 SUMO2P10-201ENST00000452006 288 ntBASIC9.74□□□□□ -0.85
SVIPQ8NHG7 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 MFAP5-203ENST00000433590 2308 ntTSL 2 BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 GOLGA2P5-203ENST00000397112 2632 ntTSL 2 BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 AL590440.2-201ENST00000641973 1595 ntBASIC9.74□□□□□ -0.85
SVIPQ8NHG7 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 ZSCAN31-219ENST00000611469 2669 ntTSL 4 BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 ZNF213-AS1-204ENST00000572691 3232 ntTSL 5 BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 RAB7B-202ENST00000617991 3014 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 TTC8-207ENST00000536576 2209 ntTSL 5 BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 TCTE1-202ENST00000371505 3067 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SVIPQ8NHG7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 AC093525.9-201ENST00000624961 1746 ntBASIC9.73□□□□□ -0.85
SVIPQ8NHG7 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 POLR1B-216ENST00000537335 4961 ntTSL 2 BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 WT1-AS-201ENST00000395900 3828 ntTSL 2 BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 PPP2R3A-205ENST00000490467 1782 ntTSL 2 BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 CAST-222ENST00000508579 1758 ntTSL 2 BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 DIS3L2-204ENST00000409307 2658 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 SIGLEC10-209ENST00000525998 1841 ntTSL 2 BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 GOLGA3-202ENST00000450791 8870 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 TOLLIP-207ENST00000527886 3666 ntTSL 2 BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 PLK4-211ENST00000515069 3431 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 AC006538.1-201ENST00000567905 1585 ntBASIC9.73□□□□□ -0.85
SVIPQ8NHG7 UEVLD-213ENST00000543987 2503 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 WASF3-201ENST00000335327 4790 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 PSMD10-203ENST00000340200 713 ntTSL 3 BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms