RNA–Protein interactions for RNA: ENST00000327443.8

SP1-201, Transcript of Sp1 transcription factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SP1, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-201ENST00000327443 NISCHQ9Y2I1 1504 aa20.76■□□□□ 0.91
SP1-201ENST00000327443 CCDC180Q9P1Z9 1646 aa18.36■□□□□ 0.53
SP1-201ENST00000327443 ZCCHC6Q5VYS8 1495 aaKnown RBP17.49■□□□□ 0.39
SP1-201ENST00000327443 DCAF1Q9Y4B6 1507 aa17.44■□□□□ 0.38
SP1-201ENST00000327443 PELP1Q8IZL8 1130 aaKnown RBP17.41■□□□□ 0.38
SP1-201ENST00000327443 MYO15BQ96JP2 1530 aa17.29■□□□□ 0.36
SP1-201ENST00000327443 MYT1Q01538 1121 aa17.02■□□□□ 0.32
SP1-201ENST00000327443 NACADO15069 1562 aa17■□□□□ 0.31
SP1-201ENST00000327443 ABCC9O60706 1549 aa16.82■□□□□ 0.28
SP1-201ENST00000327443 RB1CC1Q8TDY2 1594 aa16.79■□□□□ 0.28
SP1-201ENST00000327443 DCAF8L2P0C7V8 631 aa16.49■□□□□ 0.23
SP1-201ENST00000327443 SCRIBQ14160 1630 aa16.47■□□□□ 0.23
SP1-201ENST00000327443 HRCP23327 699 aa16.45■□□□□ 0.22
SP1-201ENST00000327443 UNC13AQ9UPW8 1703 aa16.41■□□□□ 0.22
SP1-201ENST00000327443 SHROOM4Q9ULL8 1493 aa16.4■□□□□ 0.22
SP1-201ENST00000327443 TTBK1Q5TCY1 1321 aaPredicted RBP16.27■□□□□ 0.2
SP1-201ENST00000327443 BICRAQ9NZM4 1560 aa16.22■□□□□ 0.19
SP1-201ENST00000327443 SCAF1Q9H7N4 1312 aaKnown RBP16.21■□□□□ 0.19
SP1-201ENST00000327443 PRKCSHP14314 528 aaPredicted RBP16.19■□□□□ 0.18
SP1-201ENST00000327443 PPARGC1BQ86YN6 1023 aaKnown RBP16.19■□□□□ 0.18
SP1-201ENST00000327443 BAZ1AQ9NRL2 1556 aaPredicted RBP16.08■□□□□ 0.16
SP1-201ENST00000327443 RSF1Q96T23 1441 aaPredicted RBP16■□□□□ 0.15
SP1-201ENST00000327443 SMARCA4P51532 1647 aa15.98■□□□□ 0.15
SP1-201ENST00000327443 PEG3Q9GZU2 1588 aa15.96■□□□□ 0.15
SP1-201ENST00000327443 BCL11AQ9H165 835 aa15.94■□□□□ 0.14
SP1-201ENST00000327443 CECR2Q9BXF3 1484 aa15.91■□□□□ 0.14
SP1-201ENST00000327443 MROH2BQ7Z745 1585 aa15.91■□□□□ 0.14
SP1-201ENST00000327443 FAM9AQ8IZU1 332 aaPredicted RBP15.79■□□□□ 0.12
SP1-201ENST00000327443 TOP2AP11388 1531 aaKnown RBP15.79■□□□□ 0.12
SP1-201ENST00000327443 SMARCA2P51531 1590 aa15.77■□□□□ 0.11
SP1-201ENST00000327443 WIZO95785 1651 aa15.77■□□□□ 0.11
SP1-201ENST00000327443 SUPT5HO00267 1087 aaKnown RBP15.74■□□□□ 0.11
SP1-201ENST00000327443 EIF4G1Q04637 1599 aaKnown RBP15.7■□□□□ 0.1
SP1-201ENST00000327443 PABPN1Q86U42 306 aaKnown RBP eCLIP15.69■□□□□ 0.1
SP1-201ENST00000327443 HMGXB3Q12766 1538 aa15.68■□□□□ 0.1
SP1-201ENST00000327443 PCGF6Q9BYE7 350 aa15.67■□□□□ 0.1
SP1-201ENST00000327443 ERICH6Q7L0X2 663 aa15.67■□□□□ 0.1
SP1-201ENST00000327443 ATAD2BQ9ULI0 1458 aa15.65■□□□□ 0.1
SP1-201ENST00000327443 NCAPD3P42695 1498 aa15.62■□□□□ 0.09
SP1-201ENST00000327443 APLP2Q06481 763 aa15.61■□□□□ 0.09
SP1-201ENST00000327443 BAZ1BQ9UIG0 1483 aaKnown RBP15.53■□□□□ 0.08
SP1-201ENST00000327443 CENPBP07199 599 aaPredicted RBP15.48■□□□□ 0.07
SP1-201ENST00000327443 CCDC88BA6NC98 1476 aa15.47■□□□□ 0.07
SP1-201ENST00000327443 ACIN1Q9UKV3 1341 aaKnown RBP15.44■□□□□ 0.06
SP1-201ENST00000327443 GTF3C3Q9Y5Q9 886 aa15.43■□□□□ 0.06
SP1-201ENST00000327443 CC2D2AQ9P2K1 1620 aa15.42■□□□□ 0.06
SP1-201ENST00000327443 NEUROD1Q13562 356 aa15.39■□□□□ 0.06
SP1-201ENST00000327443 PRDM2Q13029 1718 aa15.36■□□□□ 0.05
SP1-201ENST00000327443 CHIC1Q5VXU3 224 aa15.3■□□□□ 0.04
SP1-201ENST00000327443 SLC24A1O60721 1099 aa15.25■□□□□ 0.03
SP1-201ENST00000327443 CFTRP13569 1480 aa15.23■□□□□ 0.03
SP1-201ENST00000327443 ANP32EQ9BTT0 268 aa15.16■□□□□ 0.02
SP1-201ENST00000327443 LAMC3Q9Y6N6 1575 aa15.13■□□□□ 0.01
SP1-201ENST00000327443 BIVM-ERCC5R4GMW8 1640 aa15.12■□□□□ 0.01
SP1-201ENST00000327443 CSRNP3Q8WYN3 585 aa15.1■□□□□ 0.01
SP1-201ENST00000327443 CADPSQ9ULU8 1353 aa15.1■□□□□ 0.01
SP1-201ENST00000327443 TOP2BQ02880 1626 aa15.07■□□□□ 0
SP1-201ENST00000327443 ZEB1P37275 1124 aaPredicted RBP15.07■□□□□ 0
SP1-201ENST00000327443 WRNQ14191 1432 aaPredicted RBP eCLIP15.05■□□□□ -03e-7■■■■□ 25.1
SP1-201ENST00000327443 EEA1Q15075 1411 aa15.04■□□□□ -0
SP1-201ENST00000327443 ABCC8Q09428 1581 aa15.01□□□□□ -0.01
SP1-201ENST00000327443 SYNJ1O43426 1573 aa15□□□□□ -0.01
SP1-201ENST00000327443 TRIM41Q8WV44 630 aa14.99□□□□□ -0.01
SP1-201ENST00000327443 CUX1P39880 1505 aa14.92□□□□□ -0.02
SP1-201ENST00000327443 DNMBPQ6XZF7 1577 aa14.91□□□□□ -0.02
SP1-201ENST00000327443 FANCD2Q9BXW9 1451 aa14.9□□□□□ -0.02
SP1-201ENST00000327443 PDS5BQ9NTI5 1447 aa14.89□□□□□ -0.03
SP1-201ENST00000327443 ANO8Q9HCE9 1232 aaPredicted RBP14.88□□□□□ -0.03
SP1-201ENST00000327443 CEP164Q9UPV0 1460 aa14.85□□□□□ -0.03
SP1-201ENST00000327443 KIF21BO75037 1637 aa14.83□□□□□ -0.04
SP1-201ENST00000327443 EIF5BO60841 1220 aaKnown RBP14.81□□□□□ -0.04
SP1-201ENST00000327443 WDR97A6NE52 1622 aa14.8□□□□□ -0.04
SP1-201ENST00000327443 KIF21AQ7Z4S6 1674 aa14.79□□□□□ -0.04
SP1-201ENST00000327443 LOC105371045A0A1W2PR82 267 aa14.78□□□□□ -0.04
SP1-201ENST00000327443 NESP48681 1621 aa14.78□□□□□ -0.04
SP1-201ENST00000327443 TOPBP1Q92547 1522 aa14.78□□□□□ -0.04
SP1-201ENST00000327443 TRIM26Q12899 539 aaPredicted RBP14.77□□□□□ -0.04
SP1-201ENST00000327443 ERICH3Q5RHP9 1530 aa14.75□□□□□ -0.05
SP1-201ENST00000327443 ABCA10Q8WWZ4 1543 aa14.73□□□□□ -0.05
SP1-201ENST00000327443 MRC2Q9UBG0 1479 aa14.73□□□□□ -0.05
SP1-201ENST00000327443 WDR62O43379 1518 aa14.72□□□□□ -0.05
SP1-201ENST00000327443 URB2Q14146 1524 aaKnown RBP14.72□□□□□ -0.05
SP1-201ENST00000327443 FGD5Q6ZNL6 1462 aa14.72□□□□□ -0.05
SP1-201ENST00000327443 SOGA1O94964 1423 aa14.72□□□□□ -0.05
SP1-201ENST00000327443 KIF27Q86VH2 1401 aa14.71□□□□□ -0.06
SP1-201ENST00000327443 DAXXQ9UER7 740 aaPredicted RBP14.7□□□□□ -0.06
SP1-201ENST00000327443 DNAJC5BQ9UF47 199 aa14.7□□□□□ -0.06
SP1-201ENST00000327443 GOLGA3Q08378 1498 aa14.68□□□□□ -0.06
SP1-201ENST00000327443 POLA1P09884 1462 aaPredicted RBP14.68□□□□□ -0.06
SP1-201ENST00000327443 PRXQ9BXM0 1461 aa14.66□□□□□ -0.06
SP1-201ENST00000327443 EHMT2Q96KQ7 1210 aa14.65□□□□□ -0.06
SP1-201ENST00000327443 THOC2Q8NI27 1593 aaKnown RBP14.65□□□□□ -0.06
SP1-201ENST00000327443 PLEKHG5O94827 1062 aa14.65□□□□□ -0.06
SP1-201ENST00000327443 UBE2Q2Q8WVN8 375 aa14.65□□□□□ -0.06
SP1-201ENST00000327443 ABCA5Q8WWZ7 1642 aa14.65□□□□□ -0.06
SP1-201ENST00000327443 TARBP1Q13395 1621 aaKnown RBP14.64□□□□□ -0.07
SP1-201ENST00000327443 CUL7Q14999 1698 aa14.64□□□□□ -0.07
SP1-201ENST00000327443 TNIKQ9UKE5 1360 aa14.63□□□□□ -0.07
SP1-201ENST00000327443 TSHZ2Q9NRE2 1034 aa14.62□□□□□ -0.07
SP1-201ENST00000327443 RUSC2Q8N2Y8 1516 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms