Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 AC022144.1-201ENST00000602255 1580 ntBASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 AL512638.1-201ENST00000457493 794 ntBASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 RNA5SP421-201ENST00000516864 134 ntBASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 AL355385.1-201ENST00000606123 409 ntBASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 AC008738.7-201ENST00000609744 511 ntBASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
ZIC4Q8N9L1 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 AC114501.2-201ENST00000439631 535 ntBASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 RPL13P2-201ENST00000440687 659 ntBASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC4Q8N9L1 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 AC092127.1-201ENST00000567093 3455 ntBASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.04□□□□□ -0.16
ZIC4Q8N9L1 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms