Protein–RNA interactions for Protein: Q12770

SCAP, Sterol regulatory element-binding protein cleavage-activating protein, humanhuman

Predictions only

Length 1,279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPQ12770 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCAPQ12770 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCAPQ12770 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCAPQ12770 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCAPQ12770 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCAPQ12770 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.4■□□□□ 0.22
SCAPQ12770 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.4■□□□□ 0.22
SCAPQ12770 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.4■□□□□ 0.22
SCAPQ12770 COX5BP8-201ENST00000416911 349 ntBASIC16.4■□□□□ 0.22
SCAPQ12770 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCAPQ12770 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.4■□□□□ 0.22
SCAPQ12770 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.4■□□□□ 0.22
SCAPQ12770 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.4■□□□□ 0.22
SCAPQ12770 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCAPQ12770 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.4■□□□□ 0.22
SCAPQ12770 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCAPQ12770 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SCAPQ12770 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.4■□□□□ 0.22
SCAPQ12770 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCAPQ12770 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCAPQ12770 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCAPQ12770 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCAPQ12770 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.4■□□□□ 0.22
SCAPQ12770 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SCAPQ12770 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCAPQ12770 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCAPQ12770 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
SCAPQ12770 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
SCAPQ12770 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SCAPQ12770 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.39■□□□□ 0.22
SCAPQ12770 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCAPQ12770 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCAPQ12770 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCAPQ12770 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCAPQ12770 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCAPQ12770 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SCAPQ12770 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SCAPQ12770 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.39■□□□□ 0.21
SCAPQ12770 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.39■□□□□ 0.21
SCAPQ12770 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCAPQ12770 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCAPQ12770 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCAPQ12770 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.39■□□□□ 0.21
SCAPQ12770 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.39■□□□□ 0.21
SCAPQ12770 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.39■□□□□ 0.21
SCAPQ12770 ARSEP1-201ENST00000420443 635 ntBASIC16.39■□□□□ 0.21
SCAPQ12770 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.39■□□□□ 0.21
SCAPQ12770 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.39■□□□□ 0.21
SCAPQ12770 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.39■□□□□ 0.21
SCAPQ12770 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.39■□□□□ 0.21
SCAPQ12770 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.39■□□□□ 0.21
SCAPQ12770 SDHAP3-202ENST00000515467 728 ntBASIC16.39■□□□□ 0.21
SCAPQ12770 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.39■□□□□ 0.21
SCAPQ12770 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.39■□□□□ 0.21
SCAPQ12770 AC074044.1-201ENST00000609673 707 ntBASIC16.39■□□□□ 0.21
SCAPQ12770 MIR6799-201ENST00000620297 69 ntBASIC16.39■□□□□ 0.21
SCAPQ12770 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SCAPQ12770 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCAPQ12770 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCAPQ12770 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCAPQ12770 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SCAPQ12770 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.39■□□□□ 0.21
SCAPQ12770 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.39■□□□□ 0.21
SCAPQ12770 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCAPQ12770 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SCAPQ12770 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCAPQ12770 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCAPQ12770 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SCAPQ12770 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SCAPQ12770 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
SCAPQ12770 PRAL-201ENST00000624952 3286 ntBASIC16.39■□□□□ 0.21
SCAPQ12770 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.39■□□□□ 0.21
SCAPQ12770 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCAPQ12770 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCAPQ12770 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCAPQ12770 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SCAPQ12770 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCAPQ12770 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCAPQ12770 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SCAPQ12770 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCAPQ12770 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SCAPQ12770 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.38■□□□□ 0.21
SCAPQ12770 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SCAPQ12770 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.38■□□□□ 0.21
SCAPQ12770 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.38■□□□□ 0.21
SCAPQ12770 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SCAPQ12770 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SCAPQ12770 AC008741.2-201ENST00000612792 3115 ntBASIC16.38■□□□□ 0.21
SCAPQ12770 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCAPQ12770 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCAPQ12770 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCAPQ12770 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCAPQ12770 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCAPQ12770 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.38■□□□□ 0.21
SCAPQ12770 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SCAPQ12770 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SCAPQ12770 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.38■□□□□ 0.21
SCAPQ12770 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCAPQ12770 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCAPQ12770 PIN1P1-201ENST00000412108 996 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms