Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CKS1BP61024 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CKS1BP61024 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
CKS1BP61024 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS1BP61024 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS1BP61024 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
CKS1BP61024 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CKS1BP61024 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
CKS1BP61024 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS1BP61024 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC11.28□□□□□ -0.6
CKS1BP61024 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CKS1BP61024 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS1BP61024 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS1BP61024 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
CKS1BP61024 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC11.28□□□□□ -0.6
CKS1BP61024 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS1BP61024 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
CKS1BP61024 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CKS1BP61024 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC11.28□□□□□ -0.6
CKS1BP61024 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
CKS1BP61024 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CKS1BP61024 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC11.28□□□□□ -0.6
CKS1BP61024 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC11.28□□□□□ -0.6
CKS1BP61024 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
CKS1BP61024 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CKS1BP61024 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC11.28□□□□□ -0.6
CKS1BP61024 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS1BP61024 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS1BP61024 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS1BP61024 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
CKS1BP61024 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC11.28□□□□□ -0.6
CKS1BP61024 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS1BP61024 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS1BP61024 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS1BP61024 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS1BP61024 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS1BP61024 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS1BP61024 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS1BP61024 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS1BP61024 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC11.28□□□□□ -0.6
CKS1BP61024 AL020989.1-201ENST00000422979 469 ntBASIC11.28□□□□□ -0.6
CKS1BP61024 ACTG1P4-201ENST00000425123 1122 ntBASIC11.28□□□□□ -0.6
CKS1BP61024 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC11.28□□□□□ -0.6
CKS1BP61024 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CKS1BP61024 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC11.28□□□□□ -0.6
CKS1BP61024 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CKS1BP61024 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC11.28□□□□□ -0.6
CKS1BP61024 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC11.28□□□□□ -0.6
CKS1BP61024 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC11.28□□□□□ -0.6
CKS1BP61024 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC11.28□□□□□ -0.6
CKS1BP61024 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CKS1BP61024 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CKS1BP61024 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC11.28□□□□□ -0.6
CKS1BP61024 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS1BP61024 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC11.28□□□□□ -0.6
CKS1BP61024 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS1BP61024 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
CKS1BP61024 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CKS1BP61024 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS1BP61024 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
CKS1BP61024 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC11.28□□□□□ -0.6
CKS1BP61024 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC11.28□□□□□ -0.6
CKS1BP61024 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS1BP61024 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
CKS1BP61024 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
CKS1BP61024 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC11.28□□□□□ -0.6
CKS1BP61024 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC11.28□□□□□ -0.6
CKS1BP61024 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CKS1BP61024 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS1BP61024 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CKS1BP61024 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS1BP61024 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CKS1BP61024 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
CKS1BP61024 AMT-206ENST00000458307 1860 ntTSL 2 BASIC11.27□□□□□ -0.6
CKS1BP61024 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
CKS1BP61024 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.6
CKS1BP61024 AC073508.3-201ENST00000619697 1419 ntBASIC11.27□□□□□ -0.6
CKS1BP61024 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
CKS1BP61024 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CKS1BP61024 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC11.27□□□□□ -0.6
CKS1BP61024 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
CKS1BP61024 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.6
CKS1BP61024 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CKS1BP61024 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC11.27□□□□□ -0.6
CKS1BP61024 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
CKS1BP61024 FOS-208ENST00000555686 1496 ntTSL 2 BASIC11.27□□□□□ -0.6
CKS1BP61024 MED25-212ENST00000618715 1467 ntTSL 5 BASIC11.27□□□□□ -0.6
CKS1BP61024 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CKS1BP61024 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS1BP61024 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC11.27□□□□□ -0.61
CKS1BP61024 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
CKS1BP61024 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CKS1BP61024 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC11.27□□□□□ -0.61
CKS1BP61024 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
CKS1BP61024 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
CKS1BP61024 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS1BP61024 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS1BP61024 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CKS1BP61024 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC11.27□□□□□ -0.61
CKS1BP61024 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC11.27□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms