Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.42■□□□□ 0.7
PDE1AP54750 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.42■□□□□ 0.7
PDE1AP54750 AC051619.7-201ENST00000568314 623 ntBASIC19.42■□□□□ 0.7
PDE1AP54750 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.42■□□□□ 0.7
PDE1AP54750 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.42■□□□□ 0.7
PDE1AP54750 SPDYE12P-201ENST00000618416 771 ntBASIC19.42■□□□□ 0.7
PDE1AP54750 AC093028.1-201ENST00000622998 982 ntBASIC19.42■□□□□ 0.7
PDE1AP54750 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE1AP54750 GRN-214ENST00000589265 1632 ntTSL 5 BASIC19.42■□□□□ 0.7
PDE1AP54750 TUBB3P1-201ENST00000405796 1332 ntBASIC19.42■□□□□ 0.7
PDE1AP54750 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC19.42■□□□□ 0.7
PDE1AP54750 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE1AP54750 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE1AP54750 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE1AP54750 PGR-210ENST00000619228 3038 ntTSL 5 BASIC19.42■□□□□ 0.7
PDE1AP54750 BANP-201ENST00000286122 2368 ntTSL 5 BASIC19.42■□□□□ 0.7
PDE1AP54750 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE1AP54750 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE1AP54750 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE1AP54750 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE1AP54750 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PDE1AP54750 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE1AP54750 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC19.42■□□□□ 0.7
PDE1AP54750 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PDE1AP54750 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
PDE1AP54750 AC087481.3-201ENST00000602886 1894 ntBASIC19.41■□□□□ 0.7
PDE1AP54750 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE1AP54750 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDE1AP54750 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC19.41■□□□□ 0.7
PDE1AP54750 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE1AP54750 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDE1AP54750 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE1AP54750 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE1AP54750 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PDE1AP54750 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE1AP54750 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE1AP54750 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PDE1AP54750 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDE1AP54750 CNN2P2-201ENST00000443536 909 ntBASIC19.41■□□□□ 0.7
PDE1AP54750 CNN2P3-201ENST00000450201 906 ntBASIC19.41■□□□□ 0.7
PDE1AP54750 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDE1AP54750 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDE1AP54750 AC025678.2-201ENST00000562061 970 ntBASIC19.41■□□□□ 0.7
PDE1AP54750 AC004449.1-201ENST00000564240 433 ntBASIC19.41■□□□□ 0.7
PDE1AP54750 AL136317.3-201ENST00000618497 906 ntBASIC19.41■□□□□ 0.7
PDE1AP54750 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
PDE1AP54750 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.41■□□□□ 0.7
PDE1AP54750 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE1AP54750 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE1AP54750 AC144831.1-201ENST00000573312 2656 ntBASIC19.41■□□□□ 0.7
PDE1AP54750 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDE1AP54750 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE1AP54750 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE1AP54750 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE1AP54750 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PDE1AP54750 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE1AP54750 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDE1AP54750 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDE1AP54750 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDE1AP54750 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC19.4■□□□□ 0.7
PDE1AP54750 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDE1AP54750 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC19.4■□□□□ 0.7
PDE1AP54750 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDE1AP54750 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PDE1AP54750 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PDE1AP54750 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDE1AP54750 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PDE1AP54750 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDE1AP54750 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDE1AP54750 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PDE1AP54750 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PDE1AP54750 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PDE1AP54750 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDE1AP54750 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PDE1AP54750 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PDE1AP54750 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDE1AP54750 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.4■□□□□ 0.7
PDE1AP54750 TARDBPP1-201ENST00000442013 1203 ntBASIC19.4■□□□□ 0.7
PDE1AP54750 HLA-V-204ENST00000476601 1289 ntBASIC19.4■□□□□ 0.7
PDE1AP54750 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDE1AP54750 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDE1AP54750 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC19.4■□□□□ 0.7
PDE1AP54750 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.4■□□□□ 0.7
PDE1AP54750 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDE1AP54750 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PDE1AP54750 AL138828.2-201ENST00000615812 383 ntBASIC19.4■□□□□ 0.7
PDE1AP54750 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PDE1AP54750 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PDE1AP54750 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PDE1AP54750 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDE1AP54750 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.4■□□□□ 0.7
PDE1AP54750 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.4■□□□□ 0.7
PDE1AP54750 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.4■□□□□ 0.7
PDE1AP54750 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC19.4■□□□□ 0.7
PDE1AP54750 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC19.4■□□□□ 0.7
PDE1AP54750 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDE1AP54750 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDE1AP54750 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
PDE1AP54750 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PDE1AP54750 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms