Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SLC1A3P43003 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SLC1A3P43003 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC1A3P43003 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.72□□□□□ -0.05
SLC1A3P43003 AC023157.3-201ENST00000619086 2088 ntBASIC14.72□□□□□ -0.05
SLC1A3P43003 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC1A3P43003 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC1A3P43003 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SLC1A3P43003 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A3P43003 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.71□□□□□ -0.05
SLC1A3P43003 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.71□□□□□ -0.05
SLC1A3P43003 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.71□□□□□ -0.05
SLC1A3P43003 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A3P43003 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.71□□□□□ -0.05
SLC1A3P43003 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A3P43003 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
SLC1A3P43003 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A3P43003 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A3P43003 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SLC1A3P43003 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A3P43003 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A3P43003 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A3P43003 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A3P43003 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.71□□□□□ -0.05
SLC1A3P43003 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A3P43003 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A3P43003 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A3P43003 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.05
SLC1A3P43003 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.71□□□□□ -0.05
SLC1A3P43003 HLA-H-201ENST00000383620 1096 ntBASIC14.71□□□□□ -0.05
SLC1A3P43003 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A3P43003 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.71□□□□□ -0.05
SLC1A3P43003 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.71□□□□□ -0.05
SLC1A3P43003 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.71□□□□□ -0.05
SLC1A3P43003 AC069335.1-201ENST00000489972 472 ntBASIC14.71□□□□□ -0.05
SLC1A3P43003 AC112482.1-201ENST00000492080 688 ntBASIC14.71□□□□□ -0.05
SLC1A3P43003 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.71□□□□□ -0.05
SLC1A3P43003 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.71□□□□□ -0.05
SLC1A3P43003 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.71□□□□□ -0.05
SLC1A3P43003 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.71□□□□□ -0.05
SLC1A3P43003 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.71□□□□□ -0.05
SLC1A3P43003 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A3P43003 AC022145.2-201ENST00000598203 171 ntBASIC14.71□□□□□ -0.05
SLC1A3P43003 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SLC1A3P43003 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A3P43003 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A3P43003 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A3P43003 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A3P43003 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A3P43003 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SLC1A3P43003 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
SLC1A3P43003 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SLC1A3P43003 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
SLC1A3P43003 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.71□□□□□ -0.06
SLC1A3P43003 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
SLC1A3P43003 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.71□□□□□ -0.06
SLC1A3P43003 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SLC1A3P43003 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
SLC1A3P43003 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SLC1A3P43003 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC1A3P43003 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC1A3P43003 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.7□□□□□ -0.06
SLC1A3P43003 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC1A3P43003 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.7□□□□□ -0.06
SLC1A3P43003 AC011477.6-201ENST00000604980 1927 ntBASIC14.7□□□□□ -0.06
SLC1A3P43003 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SLC1A3P43003 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.7□□□□□ -0.06
SLC1A3P43003 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC1A3P43003 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC1A3P43003 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC1A3P43003 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SLC1A3P43003 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SLC1A3P43003 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.7□□□□□ -0.06
SLC1A3P43003 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SLC1A3P43003 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC1A3P43003 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.7□□□□□ -0.06
SLC1A3P43003 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC1A3P43003 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC1A3P43003 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SLC1A3P43003 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC1A3P43003 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SLC1A3P43003 RPSAP43-201ENST00000402237 625 ntBASIC14.7□□□□□ -0.06
SLC1A3P43003 MIR1233-2-201ENST00000408138 82 ntBASIC14.7□□□□□ -0.06
SLC1A3P43003 MIR1233-1-201ENST00000408722 82 ntBASIC14.7□□□□□ -0.06
SLC1A3P43003 UPF3AP3-201ENST00000420996 769 ntBASIC14.7□□□□□ -0.06
SLC1A3P43003 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
SLC1A3P43003 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
SLC1A3P43003 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.7□□□□□ -0.06
SLC1A3P43003 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.7□□□□□ -0.06
SLC1A3P43003 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.7□□□□□ -0.06
SLC1A3P43003 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.7□□□□□ -0.06
SLC1A3P43003 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SLC1A3P43003 AC010327.4-202ENST00000591484 748 ntBASIC14.7□□□□□ -0.06
SLC1A3P43003 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.7□□□□□ -0.06
SLC1A3P43003 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.7□□□□□ -0.06
SLC1A3P43003 AC055717.3-201ENST00000622967 595 ntBASIC14.7□□□□□ -0.06
SLC1A3P43003 AL513210.1-201ENST00000629608 234 ntBASIC14.7□□□□□ -0.06
SLC1A3P43003 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC1A3P43003 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
SLC1A3P43003 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms