Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.88■□□□□ 0.29
CCDC130P13994 RN7SL204P-201ENST00000582831 262 ntBASIC16.88■□□□□ 0.29
CCDC130P13994 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC130P13994 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC130P13994 AC008741.2-201ENST00000612792 3115 ntBASIC16.88■□□□□ 0.29
CCDC130P13994 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC130P13994 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC130P13994 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC130P13994 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC130P13994 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC130P13994 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC130P13994 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC130P13994 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC130P13994 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC130P13994 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC130P13994 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC130P13994 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CCDC130P13994 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC130P13994 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC130P13994 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC130P13994 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC130P13994 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC130P13994 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC130P13994 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC130P13994 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC130P13994 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC130P13994 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC130P13994 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC130P13994 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC130P13994 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC130P13994 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC130P13994 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC130P13994 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC130P13994 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC130P13994 AC002472.2-201ENST00000442739 958 ntBASIC16.87■□□□□ 0.29
CCDC130P13994 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.87■□□□□ 0.29
CCDC130P13994 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC130P13994 SDHAP3-202ENST00000515467 728 ntBASIC16.87■□□□□ 0.29
CCDC130P13994 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.87■□□□□ 0.29
CCDC130P13994 AC104794.3-201ENST00000566840 1248 ntBASIC16.87■□□□□ 0.29
CCDC130P13994 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC130P13994 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.87■□□□□ 0.29
CCDC130P13994 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.87■□□□□ 0.29
CCDC130P13994 AC004790.1-201ENST00000612686 536 ntBASIC16.87■□□□□ 0.29
CCDC130P13994 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CCDC130P13994 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC130P13994 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC130P13994 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CCDC130P13994 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC130P13994 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC130P13994 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC130P13994 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC130P13994 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CCDC130P13994 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC130P13994 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC130P13994 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC130P13994 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC130P13994 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC130P13994 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC130P13994 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC130P13994 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC130P13994 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC130P13994 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC130P13994 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC130P13994 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC130P13994 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC130P13994 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CCDC130P13994 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC130P13994 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CCDC130P13994 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC130P13994 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CCDC130P13994 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC130P13994 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC130P13994 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC130P13994 AC074338.1-201ENST00000416825 156 ntBASIC16.86■□□□□ 0.29
CCDC130P13994 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.86■□□□□ 0.29
CCDC130P13994 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.86■□□□□ 0.29
CCDC130P13994 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.86■□□□□ 0.29
CCDC130P13994 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CCDC130P13994 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.86■□□□□ 0.29
CCDC130P13994 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.86■□□□□ 0.29
CCDC130P13994 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CCDC130P13994 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
CCDC130P13994 LINC02560-201ENST00000596379 459 ntBASIC16.86■□□□□ 0.29
CCDC130P13994 AC004461.2-201ENST00000629517 803 ntBASIC16.86■□□□□ 0.29
CCDC130P13994 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC130P13994 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC130P13994 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC130P13994 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC130P13994 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC130P13994 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC130P13994 PRAL-201ENST00000624952 3286 ntBASIC16.86■□□□□ 0.29
CCDC130P13994 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC130P13994 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
CCDC130P13994 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC130P13994 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC130P13994 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC130P13994 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC130P13994 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC130P13994 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms