Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
TRBV12-3P01733 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
TRBV12-3P01733 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.33□□□□□ -0.43
TRBV12-3P01733 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
TRBV12-3P01733 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
TRBV12-3P01733 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV12-3P01733 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV12-3P01733 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV12-3P01733 KRT8P12-202ENST00000472924 1397 ntBASIC12.33□□□□□ -0.44
TRBV12-3P01733 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
TRBV12-3P01733 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC12.33□□□□□ -0.44
TRBV12-3P01733 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC12.33□□□□□ -0.44
TRBV12-3P01733 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV12-3P01733 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
TRBV12-3P01733 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV12-3P01733 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV12-3P01733 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.33□□□□□ -0.44
TRBV12-3P01733 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC12.33□□□□□ -0.44
TRBV12-3P01733 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC12.33□□□□□ -0.44
TRBV12-3P01733 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV12-3P01733 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC12.33□□□□□ -0.44
TRBV12-3P01733 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV12-3P01733 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC12.33□□□□□ -0.44
TRBV12-3P01733 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV12-3P01733 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV12-3P01733 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV12-3P01733 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.33□□□□□ -0.44
TRBV12-3P01733 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
TRBV12-3P01733 SPDYE17-201ENST00000412399 783 ntBASIC12.33□□□□□ -0.44
TRBV12-3P01733 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC12.33□□□□□ -0.44
TRBV12-3P01733 AC055876.3-201ENST00000431496 288 ntBASIC12.33□□□□□ -0.44
TRBV12-3P01733 HIST3H2BA-201ENST00000436555 524 ntBASIC12.33□□□□□ -0.44
TRBV12-3P01733 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.33□□□□□ -0.44
TRBV12-3P01733 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
TRBV12-3P01733 AC093214.1-201ENST00000511688 1107 ntBASIC12.33□□□□□ -0.44
TRBV12-3P01733 EHF-205ENST00000527935 557 ntTSL 2 BASIC12.33□□□□□ -0.44
TRBV12-3P01733 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV12-3P01733 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.33□□□□□ -0.44
TRBV12-3P01733 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.33□□□□□ -0.44
TRBV12-3P01733 AC138649.4-201ENST00000612222 287 ntBASIC12.33□□□□□ -0.44
TRBV12-3P01733 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV12-3P01733 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV12-3P01733 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
TRBV12-3P01733 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV12-3P01733 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV12-3P01733 AC100757.3-201ENST00000622361 1406 ntBASIC12.33□□□□□ -0.44
TRBV12-3P01733 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
TRBV12-3P01733 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC12.33□□□□□ -0.44
TRBV12-3P01733 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
TRBV12-3P01733 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV12-3P01733 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC12.33□□□□□ -0.44
TRBV12-3P01733 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
TRBV12-3P01733 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV12-3P01733 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV12-3P01733 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV12-3P01733 CASK-202ENST00000378158 3848 ntTSL 5 BASIC12.33□□□□□ -0.44
TRBV12-3P01733 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC12.33□□□□□ -0.44
TRBV12-3P01733 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV12-3P01733 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV12-3P01733 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
TRBV12-3P01733 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC12.33□□□□□ -0.44
TRBV12-3P01733 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC12.33□□□□□ -0.44
TRBV12-3P01733 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV12-3P01733 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV12-3P01733 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC12.33□□□□□ -0.44
TRBV12-3P01733 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV12-3P01733 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRBV12-3P01733 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
TRBV12-3P01733 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV12-3P01733 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
TRBV12-3P01733 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC12.32□□□□□ -0.44
TRBV12-3P01733 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV12-3P01733 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
TRBV12-3P01733 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV12-3P01733 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV12-3P01733 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV12-3P01733 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV12-3P01733 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV12-3P01733 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV12-3P01733 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV12-3P01733 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV12-3P01733 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC12.32□□□□□ -0.44
TRBV12-3P01733 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV12-3P01733 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV12-3P01733 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV12-3P01733 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV12-3P01733 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.32□□□□□ -0.44
TRBV12-3P01733 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.32□□□□□ -0.44
TRBV12-3P01733 EEF1DP4-201ENST00000446006 880 ntBASIC12.32□□□□□ -0.44
TRBV12-3P01733 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
TRBV12-3P01733 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.32□□□□□ -0.44
TRBV12-3P01733 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.32□□□□□ -0.44
TRBV12-3P01733 FXR1-221ENST00000491674 365 ntTSL 2 BASIC12.32□□□□□ -0.44
TRBV12-3P01733 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV12-3P01733 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV12-3P01733 AL512361.1-201ENST00000554200 418 ntBASIC12.32□□□□□ -0.44
TRBV12-3P01733 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC12.32□□□□□ -0.44
TRBV12-3P01733 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
TRBV12-3P01733 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.32□□□□□ -0.44
TRBV12-3P01733 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms