Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
SNCGO76070 ALK-205ENST00000618119 4646 ntTSL 5 BASIC10.78□□□□□ -0.68
SNCGO76070 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC10.78□□□□□ -0.68
SNCGO76070 KIAA0556-201ENST00000261588 6616 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
SNCGO76070 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SNCGO76070 AP002008.2-201ENST00000635926 4870 ntBASIC10.78□□□□□ -0.68
SNCGO76070 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
SNCGO76070 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SNCGO76070 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
SNCGO76070 MADD-209ENST00000406482 5614 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
SNCGO76070 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SNCGO76070 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
SNCGO76070 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SNCGO76070 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SNCGO76070 DDT-203ENST00000403754 569 ntTSL 3 BASIC10.78□□□□□ -0.68
SNCGO76070 TSPY12P-201ENST00000421279 868 ntBASIC10.78□□□□□ -0.68
SNCGO76070 DDT-206ENST00000430101 573 ntTSL 2 BASIC10.78□□□□□ -0.68
SNCGO76070 PVRIG2P-201ENST00000435460 978 ntBASIC10.78□□□□□ -0.68
SNCGO76070 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
SNCGO76070 CCR12P-201ENST00000446203 998 ntBASIC10.78□□□□□ -0.68
SNCGO76070 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC10.78□□□□□ -0.68
SNCGO76070 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC10.78□□□□□ -0.68
SNCGO76070 ETFA-216ENST00000560726 942 ntTSL 3 BASIC10.78□□□□□ -0.68
SNCGO76070 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC10.78□□□□□ -0.68
SNCGO76070 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SNCGO76070 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC10.78□□□□□ -0.68
SNCGO76070 AC005332.3-201ENST00000589904 676 ntBASIC10.78□□□□□ -0.68
SNCGO76070 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
SNCGO76070 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC10.78□□□□□ -0.68
SNCGO76070 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC10.78□□□□□ -0.68
SNCGO76070 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC10.78□□□□□ -0.68
SNCGO76070 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SNCGO76070 NRP1-201ENST00000265371 5882 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
SNCGO76070 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SNCGO76070 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
SNCGO76070 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SNCGO76070 FER1L5-204ENST00000623019 6477 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
SNCGO76070 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
SNCGO76070 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SNCGO76070 CARMN-210ENST00000602964 8398 ntTSL 2 BASIC10.78□□□□□ -0.68
SNCGO76070 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC10.78□□□□□ -0.68
SNCGO76070 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
SNCGO76070 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
SNCGO76070 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
SNCGO76070 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC10.78□□□□□ -0.68
SNCGO76070 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SNCGO76070 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC10.78□□□□□ -0.68
SNCGO76070 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
SNCGO76070 VWC2-201ENST00000340652 11299 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SNCGO76070 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SNCGO76070 AL109954.1-202ENST00000564051 2148 ntBASIC10.78□□□□□ -0.68
SNCGO76070 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SNCGO76070 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SNCGO76070 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
SNCGO76070 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SNCGO76070 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
SNCGO76070 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
SNCGO76070 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
SNCGO76070 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
SNCGO76070 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
SNCGO76070 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SNCGO76070 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SNCGO76070 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SNCGO76070 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.68
SNCGO76070 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SNCGO76070 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SNCGO76070 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC10.77□□□□□ -0.68
SNCGO76070 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.68
SNCGO76070 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SNCGO76070 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
SNCGO76070 OTOF-203ENST00000339598 4756 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
SNCGO76070 CCDC144A-204ENST00000360524 5830 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
SNCGO76070 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SNCGO76070 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
SNCGO76070 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC10.77□□□□□ -0.68
SNCGO76070 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC10.77□□□□□ -0.68
SNCGO76070 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
SNCGO76070 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
SNCGO76070 NTRK2-208ENST00000395882 7111 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
SNCGO76070 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
SNCGO76070 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
SNCGO76070 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.68
SNCGO76070 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
SNCGO76070 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SNCGO76070 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC10.77□□□□□ -0.69
SNCGO76070 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SNCGO76070 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SNCGO76070 POR-201ENST00000394893 2532 ntTSL 5 BASIC10.77□□□□□ -0.69
SNCGO76070 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SNCGO76070 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC10.77□□□□□ -0.69
SNCGO76070 KRT89P-201ENST00000620027 1478 ntBASIC10.77□□□□□ -0.69
SNCGO76070 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC10.77□□□□□ -0.69
SNCGO76070 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
SNCGO76070 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
SNCGO76070 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC10.77□□□□□ -0.69
SNCGO76070 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC10.77□□□□□ -0.69
SNCGO76070 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC10.77□□□□□ -0.69
SNCGO76070 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC10.77□□□□□ -0.69
SNCGO76070 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC10.77□□□□□ -0.69
SNCGO76070 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms