Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
APAF1O14727 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
APAF1O14727 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC20.93■□□□□ 0.94
APAF1O14727 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
APAF1O14727 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC20.93■□□□□ 0.94
APAF1O14727 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC20.93■□□□□ 0.94
APAF1O14727 AC093214.1-201ENST00000511688 1107 ntBASIC20.93■□□□□ 0.94
APAF1O14727 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
APAF1O14727 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC20.93■□□□□ 0.94
APAF1O14727 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
APAF1O14727 RAB34-223ENST00000636154 730 ntTSL 2 BASIC20.93■□□□□ 0.94
APAF1O14727 AL109936.8-201ENST00000641772 604 ntBASIC20.93■□□□□ 0.94
APAF1O14727 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
APAF1O14727 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
APAF1O14727 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
APAF1O14727 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
APAF1O14727 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC20.93■□□□□ 0.94
APAF1O14727 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC20.93■□□□□ 0.94
APAF1O14727 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC20.93■□□□□ 0.94
APAF1O14727 AMT-233ENST00000636522 1620 ntTSL 2 BASIC20.93■□□□□ 0.94
APAF1O14727 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
APAF1O14727 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC20.92■□□□□ 0.94
APAF1O14727 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
APAF1O14727 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC20.92■□□□□ 0.94
APAF1O14727 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
APAF1O14727 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
APAF1O14727 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
APAF1O14727 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
APAF1O14727 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
APAF1O14727 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
APAF1O14727 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
APAF1O14727 VMA21-202ENST00000370361 693 ntTSL 5 BASIC20.92■□□□□ 0.94
APAF1O14727 MRPS18AP1-201ENST00000414458 589 ntBASIC20.92■□□□□ 0.94
APAF1O14727 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC20.92■□□□□ 0.94
APAF1O14727 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
APAF1O14727 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC20.92■□□□□ 0.94
APAF1O14727 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC20.92■□□□□ 0.94
APAF1O14727 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC20.92■□□□□ 0.94
APAF1O14727 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
APAF1O14727 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC20.92■□□□□ 0.94
APAF1O14727 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC20.92■□□□□ 0.94
APAF1O14727 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
APAF1O14727 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC20.92■□□□□ 0.94
APAF1O14727 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
APAF1O14727 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
APAF1O14727 Z97205.2-201ENST00000564697 1639 ntBASIC20.92■□□□□ 0.94
APAF1O14727 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
APAF1O14727 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
APAF1O14727 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
APAF1O14727 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
APAF1O14727 ILF3-AS1-201ENST00000591501 1983 ntBASIC20.92■□□□□ 0.94
APAF1O14727 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
APAF1O14727 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
APAF1O14727 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC20.92■□□□□ 0.94
APAF1O14727 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
APAF1O14727 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
APAF1O14727 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
APAF1O14727 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
APAF1O14727 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
APAF1O14727 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
APAF1O14727 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
APAF1O14727 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
APAF1O14727 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
APAF1O14727 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
APAF1O14727 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
APAF1O14727 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
APAF1O14727 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
APAF1O14727 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
APAF1O14727 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
APAF1O14727 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
APAF1O14727 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
APAF1O14727 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
APAF1O14727 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC20.91■□□□□ 0.94
APAF1O14727 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC20.91■□□□□ 0.94
APAF1O14727 KRT18P64-201ENST00000434946 1219 ntBASIC20.91■□□□□ 0.94
APAF1O14727 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
APAF1O14727 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC20.91■□□□□ 0.94
APAF1O14727 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC20.91■□□□□ 0.94
APAF1O14727 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC20.91■□□□□ 0.94
APAF1O14727 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
APAF1O14727 LINC01115-203ENST00000606068 577 ntBASIC20.91■□□□□ 0.94
APAF1O14727 TEX48-202ENST00000612244 662 ntTSL 3 BASIC20.91■□□□□ 0.94
APAF1O14727 AF228730.6-201ENST00000641497 218 ntBASIC20.91■□□□□ 0.94
APAF1O14727 AC084121.3-201ENST00000641716 218 ntBASIC20.91■□□□□ 0.94
APAF1O14727 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
APAF1O14727 MBP-202ENST00000355994 2772 ntTSL 5 BASIC20.91■□□□□ 0.94
APAF1O14727 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
APAF1O14727 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
APAF1O14727 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
APAF1O14727 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
APAF1O14727 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
APAF1O14727 AC105250.1-201ENST00000509378 2057 ntBASIC20.9■□□□□ 0.94
APAF1O14727 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
APAF1O14727 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC20.9■□□□□ 0.94
APAF1O14727 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
APAF1O14727 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC20.9■□□□□ 0.94
APAF1O14727 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC20.9■□□□□ 0.94
APAF1O14727 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC20.9■□□□□ 0.94
APAF1O14727 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
APAF1O14727 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms