Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 TNRC18P2-201ENST00000417666 2714 ntBASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 INGX-202ENST00000489074 768 ntBASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 AC093214.1-201ENST00000511688 1107 ntBASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHGB6Q9Y5F9 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 GGT3P-204ENST00000453783 1664 ntBASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 AC006058.4-201ENST00000624016 1670 ntBASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 AC142381.1-201ENST00000426099 345 ntBASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 AC069120.2-201ENST00000524091 540 ntBASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 MIR4745-201ENST00000577608 62 ntBASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 AC020765.3-201ENST00000613051 740 ntBASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms