Protein–RNA interactions for Protein: Q9Y4E8

USP15, Ubiquitin carboxyl-terminal hydrolase 15, humanhuman

Predicted RBP Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP15Q9Y4E8 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
USP15Q9Y4E8 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP15Q9Y4E8 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.25■□□□□ 0.35
USP15Q9Y4E8 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.25■□□□□ 0.35
USP15Q9Y4E8 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.25■□□□□ 0.35
USP15Q9Y4E8 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
USP15Q9Y4E8 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 AC119751.2-201ENST00000504529 210 ntBASIC17.24■□□□□ 0.35
USP15Q9Y4E8 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 AC092552.1-201ENST00000547243 906 ntBASIC17.24■□□□□ 0.35
USP15Q9Y4E8 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.24■□□□□ 0.35
USP15Q9Y4E8 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 AC104640.1-201ENST00000562617 2109 ntBASIC17.23■□□□□ 0.35
USP15Q9Y4E8 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 REXO1L6P-201ENST00000603433 1515 ntBASIC17.23■□□□□ 0.35
USP15Q9Y4E8 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.23■□□□□ 0.35
USP15Q9Y4E8 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP15Q9Y4E8 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.22■□□□□ 0.35
USP15Q9Y4E8 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
USP15Q9Y4E8 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP15Q9Y4E8 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP15Q9Y4E8 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms