Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 AL589987.1-201ENST00000453380 819 ntBASIC16.28■□□□□ 0.2
EBF1Q9UH73 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
EBF1Q9UH73 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
EBF1Q9UH73 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
EBF1Q9UH73 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.28■□□□□ 0.2
EBF1Q9UH73 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.28■□□□□ 0.2
EBF1Q9UH73 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
EBF1Q9UH73 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
EBF1Q9UH73 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
EBF1Q9UH73 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
EBF1Q9UH73 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.28■□□□□ 0.2
EBF1Q9UH73 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EBF1Q9UH73 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EBF1Q9UH73 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
EBF1Q9UH73 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
EBF1Q9UH73 AC005915.1-201ENST00000624912 2018 ntBASIC16.28■□□□□ 0.2
EBF1Q9UH73 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EBF1Q9UH73 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EBF1Q9UH73 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
EBF1Q9UH73 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EBF1Q9UH73 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EBF1Q9UH73 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.27■□□□□ 0.2
EBF1Q9UH73 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
EBF1Q9UH73 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
EBF1Q9UH73 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
EBF1Q9UH73 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
EBF1Q9UH73 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
EBF1Q9UH73 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
EBF1Q9UH73 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EBF1Q9UH73 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
EBF1Q9UH73 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.27■□□□□ 0.2
EBF1Q9UH73 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EBF1Q9UH73 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
EBF1Q9UH73 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
EBF1Q9UH73 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.27■□□□□ 0.2
EBF1Q9UH73 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
EBF1Q9UH73 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.27■□□□□ 0.2
EBF1Q9UH73 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.27■□□□□ 0.2
EBF1Q9UH73 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
EBF1Q9UH73 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.27■□□□□ 0.2
EBF1Q9UH73 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
EBF1Q9UH73 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.27■□□□□ 0.2
EBF1Q9UH73 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
EBF1Q9UH73 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.27■□□□□ 0.2
EBF1Q9UH73 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.27■□□□□ 0.2
EBF1Q9UH73 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.27■□□□□ 0.2
EBF1Q9UH73 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.27■□□□□ 0.2
EBF1Q9UH73 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
EBF1Q9UH73 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
EBF1Q9UH73 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.27■□□□□ 0.2
EBF1Q9UH73 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.27■□□□□ 0.2
EBF1Q9UH73 AC074044.1-201ENST00000609673 707 ntBASIC16.27■□□□□ 0.2
EBF1Q9UH73 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
EBF1Q9UH73 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EBF1Q9UH73 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
EBF1Q9UH73 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.27■□□□□ 0.2
EBF1Q9UH73 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
EBF1Q9UH73 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
EBF1Q9UH73 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
EBF1Q9UH73 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
EBF1Q9UH73 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
EBF1Q9UH73 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
EBF1Q9UH73 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
EBF1Q9UH73 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
EBF1Q9UH73 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
EBF1Q9UH73 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
EBF1Q9UH73 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
EBF1Q9UH73 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
EBF1Q9UH73 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
EBF1Q9UH73 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EBF1Q9UH73 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EBF1Q9UH73 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EBF1Q9UH73 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EBF1Q9UH73 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EBF1Q9UH73 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EBF1Q9UH73 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EBF1Q9UH73 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
EBF1Q9UH73 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EBF1Q9UH73 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EBF1Q9UH73 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
EBF1Q9UH73 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.26■□□□□ 0.19
EBF1Q9UH73 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EBF1Q9UH73 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
EBF1Q9UH73 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
EBF1Q9UH73 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EBF1Q9UH73 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EBF1Q9UH73 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EBF1Q9UH73 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.26■□□□□ 0.19
EBF1Q9UH73 FO393414.2-201ENST00000405153 598 ntBASIC16.26■□□□□ 0.19
EBF1Q9UH73 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EBF1Q9UH73 AC098850.1-201ENST00000419919 790 ntBASIC16.26■□□□□ 0.19
EBF1Q9UH73 AC234783.1-201ENST00000441761 496 ntBASIC16.26■□□□□ 0.19
EBF1Q9UH73 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.26■□□□□ 0.19
EBF1Q9UH73 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.26■□□□□ 0.19
EBF1Q9UH73 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EBF1Q9UH73 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
EBF1Q9UH73 COX11-210ENST00000639671 696 ntBASIC16.26■□□□□ 0.19
EBF1Q9UH73 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EBF1Q9UH73 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
EBF1Q9UH73 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms