Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 RN7SL850P-201ENST00000579959 291 ntBASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 AC099336.1-202ENST00000602961 463 ntBASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 AL591684.3-201ENST00000605187 298 ntBASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 AL589182.2-201ENST00000619332 1049 ntBASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 REXO1L3P-201ENST00000622202 1288 ntBASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 AF228730.7-201ENST00000641842 219 ntBASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 RER1-203ENST00000378513 3000 ntTSL 3 BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 RCN1P1-201ENST00000400413 996 ntBASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 PMS2P1-201ENST00000431037 1228 ntBASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 AC087641.1-201ENST00000557561 1021 ntBASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 AC012615.1-201ENST00000565797 1299 ntBASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 SLC22A20-204ENST00000530038 1673 ntBASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
SND1-IT1Q9HBX3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 AL353732.1-201ENST00000569618 1459 ntBASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms