Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 R3HDM2P2-201ENST00000401880 2116 ntBASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC4.34□□□□□ -1.72
LCE3DQ9BYE3 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC4.34□□□□□ -1.72
LCE3DQ9BYE3 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LCE3DQ9BYE3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LCE3DQ9BYE3 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.72
LCE3DQ9BYE3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
LCE3DQ9BYE3 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LCE3DQ9BYE3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
LCE3DQ9BYE3 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
LCE3DQ9BYE3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
LCE3DQ9BYE3 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC4.34□□□□□ -1.72
LCE3DQ9BYE3 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC4.34□□□□□ -1.72
LCE3DQ9BYE3 CICP23-201ENST00000605013 2741 ntBASIC4.34□□□□□ -1.72
LCE3DQ9BYE3 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
LCE3DQ9BYE3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LCE3DQ9BYE3 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC4.34□□□□□ -1.72
LCE3DQ9BYE3 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LCE3DQ9BYE3 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.72
LCE3DQ9BYE3 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LCE3DQ9BYE3 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC4.34□□□□□ -1.72
LCE3DQ9BYE3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LCE3DQ9BYE3 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LCE3DQ9BYE3 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
LCE3DQ9BYE3 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LCE3DQ9BYE3 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LCE3DQ9BYE3 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LCE3DQ9BYE3 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
LCE3DQ9BYE3 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LCE3DQ9BYE3 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
LCE3DQ9BYE3 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
LCE3DQ9BYE3 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
LCE3DQ9BYE3 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LCE3DQ9BYE3 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LCE3DQ9BYE3 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LCE3DQ9BYE3 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LCE3DQ9BYE3 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LCE3DQ9BYE3 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 AC232323.1-201ENST00000540724 2099 ntBASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 REXO1L5P-201ENST00000622260 2098 ntBASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms