Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 PC-214ENST00000628663 1470 ntTSL 5 BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 PMS2P4-201ENST00000412466 1052 ntBASIC9.6□□□□□ -0.87
LIMD2Q9BT23 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 AL031284.1-201ENST00000419297 478 ntBASIC9.6□□□□□ -0.87
LIMD2Q9BT23 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 PPIE-208ENST00000470213 927 ntTSL 3 BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 PAM16-208ENST00000573553 722 ntTSL 2 BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 MIR4515-201ENST00000584082 81 ntBASIC9.6□□□□□ -0.87
LIMD2Q9BT23 IRF5-214ENST00000613821 595 ntTSL 5 BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 AC117500.6-201ENST00000624871 588 ntBASIC9.6□□□□□ -0.87
LIMD2Q9BT23 FAM215A-202ENST00000632077 792 ntBASIC9.6□□□□□ -0.87
LIMD2Q9BT23 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 AC005252.3-201ENST00000623855 2258 ntBASIC9.59□□□□□ -0.87
LIMD2Q9BT23 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 DPM2-202ENST00000373110 738 ntTSL 2 BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 AL513480.1-201ENST00000451731 511 ntBASIC9.59□□□□□ -0.87
LIMD2Q9BT23 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC9.59□□□□□ -0.87
LIMD2Q9BT23 AP002469.2-201ENST00000531724 424 ntBASIC9.59□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms