Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCC1Q96S66 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.55□□□□□ -0.24
CLCC1Q96S66 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCC1Q96S66 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCC1Q96S66 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCC1Q96S66 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CLCC1Q96S66 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCC1Q96S66 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.55□□□□□ -0.24
CLCC1Q96S66 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.55□□□□□ -0.24
CLCC1Q96S66 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CLCC1Q96S66 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCC1Q96S66 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCC1Q96S66 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCC1Q96S66 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLCC1Q96S66 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.55□□□□□ -0.24
CLCC1Q96S66 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCC1Q96S66 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCC1Q96S66 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLCC1Q96S66 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CLCC1Q96S66 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLCC1Q96S66 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CLCC1Q96S66 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCC1Q96S66 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCC1Q96S66 RPS2P28-201ENST00000314255 741 ntBASIC13.55□□□□□ -0.24
CLCC1Q96S66 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.55□□□□□ -0.24
CLCC1Q96S66 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.55□□□□□ -0.24
CLCC1Q96S66 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.55□□□□□ -0.24
CLCC1Q96S66 AP002414.1-201ENST00000391405 1147 ntBASIC13.55□□□□□ -0.24
CLCC1Q96S66 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLCC1Q96S66 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
CLCC1Q96S66 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.55□□□□□ -0.24
CLCC1Q96S66 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.55□□□□□ -0.24
CLCC1Q96S66 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.55□□□□□ -0.24
CLCC1Q96S66 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.55□□□□□ -0.24
CLCC1Q96S66 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC13.55□□□□□ -0.24
CLCC1Q96S66 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.55□□□□□ -0.24
CLCC1Q96S66 AL139011.1-202ENST00000642063 584 ntBASIC13.55□□□□□ -0.24
CLCC1Q96S66 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CLCC1Q96S66 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CLCC1Q96S66 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CLCC1Q96S66 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.55□□□□□ -0.24
CLCC1Q96S66 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.55□□□□□ -0.24
CLCC1Q96S66 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.55□□□□□ -0.24
CLCC1Q96S66 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCC1Q96S66 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCC1Q96S66 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLCC1Q96S66 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCC1Q96S66 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.55□□□□□ -0.24
CLCC1Q96S66 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.55□□□□□ -0.24
CLCC1Q96S66 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CLCC1Q96S66 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCC1Q96S66 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLCC1Q96S66 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLCC1Q96S66 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.55□□□□□ -0.24
CLCC1Q96S66 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CLCC1Q96S66 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CLCC1Q96S66 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
CLCC1Q96S66 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.55□□□□□ -0.24
CLCC1Q96S66 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCC1Q96S66 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
CLCC1Q96S66 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCC1Q96S66 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCC1Q96S66 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLCC1Q96S66 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLCC1Q96S66 AP002414.3-201ENST00000589352 1468 ntBASIC13.55□□□□□ -0.24
CLCC1Q96S66 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLCC1Q96S66 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLCC1Q96S66 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLCC1Q96S66 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLCC1Q96S66 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLCC1Q96S66 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLCC1Q96S66 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.54□□□□□ -0.24
CLCC1Q96S66 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CLCC1Q96S66 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLCC1Q96S66 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLCC1Q96S66 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
CLCC1Q96S66 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLCC1Q96S66 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLCC1Q96S66 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CLCC1Q96S66 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLCC1Q96S66 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLCC1Q96S66 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CLCC1Q96S66 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLCC1Q96S66 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CLCC1Q96S66 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLCC1Q96S66 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CLCC1Q96S66 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLCC1Q96S66 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLCC1Q96S66 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.54□□□□□ -0.24
CLCC1Q96S66 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLCC1Q96S66 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLCC1Q96S66 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLCC1Q96S66 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.54□□□□□ -0.24
CLCC1Q96S66 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLCC1Q96S66 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.54□□□□□ -0.24
CLCC1Q96S66 KRT18P67-201ENST00000432816 1264 ntBASIC13.54□□□□□ -0.24
CLCC1Q96S66 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.54□□□□□ -0.24
CLCC1Q96S66 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.54□□□□□ -0.24
CLCC1Q96S66 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.54□□□□□ -0.24
CLCC1Q96S66 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms