Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.03■□□□□ -0
CCDC71Q8IV32 DUX4L27-201ENST00000554796 1261 ntBASIC15.03■□□□□ -0
CCDC71Q8IV32 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.03■□□□□ -0
CCDC71Q8IV32 MIR4515-201ENST00000584082 81 ntBASIC15.03■□□□□ -0
CCDC71Q8IV32 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.03■□□□□ -0
CCDC71Q8IV32 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.03■□□□□ -0
CCDC71Q8IV32 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.03■□□□□ -0
CCDC71Q8IV32 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC71Q8IV32 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.03■□□□□ -0
CCDC71Q8IV32 AC020658.6-201ENST00000623564 1870 ntBASIC15.03■□□□□ -0
CCDC71Q8IV32 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC71Q8IV32 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.03■□□□□ -0
CCDC71Q8IV32 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.03■□□□□ -0
CCDC71Q8IV32 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC71Q8IV32 SLC22A20-204ENST00000530038 1673 ntBASIC15.03■□□□□ -0
CCDC71Q8IV32 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
CCDC71Q8IV32 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.02■□□□□ -0
CCDC71Q8IV32 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.02■□□□□ -0
CCDC71Q8IV32 AL109954.1-202ENST00000564051 2148 ntBASIC15.02■□□□□ -0
CCDC71Q8IV32 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC71Q8IV32 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC71Q8IV32 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC71Q8IV32 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC71Q8IV32 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CCDC71Q8IV32 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CCDC71Q8IV32 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC71Q8IV32 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCDC71Q8IV32 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CCDC71Q8IV32 MIR648-201ENST00000385046 94 ntBASIC15.02■□□□□ -0
CCDC71Q8IV32 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.02■□□□□ -0
CCDC71Q8IV32 AC092474.2-201ENST00000424288 719 ntBASIC15.02■□□□□ -0
CCDC71Q8IV32 KRT18P32-201ENST00000424695 1287 ntBASIC15.02■□□□□ -0
CCDC71Q8IV32 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCDC71Q8IV32 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.02■□□□□ -0
CCDC71Q8IV32 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.02■□□□□ -0
CCDC71Q8IV32 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.02■□□□□ -0
CCDC71Q8IV32 AC243562.1-201ENST00000560672 389 ntBASIC15.02■□□□□ -0
CCDC71Q8IV32 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.02■□□□□ -0
CCDC71Q8IV32 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCDC71Q8IV32 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC71Q8IV32 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CCDC71Q8IV32 CICP24-201ENST00000605464 2705 ntBASIC15.02□□□□□ -0.01
CCDC71Q8IV32 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.02□□□□□ -0.01
CCDC71Q8IV32 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC71Q8IV32 AP003680.1-201ENST00000598970 3660 ntBASIC15.02□□□□□ -0.01
CCDC71Q8IV32 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC71Q8IV32 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC71Q8IV32 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC71Q8IV32 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.02□□□□□ -0.01
CCDC71Q8IV32 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
CCDC71Q8IV32 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC71Q8IV32 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC71Q8IV32 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC71Q8IV32 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.02□□□□□ -0.01
CCDC71Q8IV32 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC71Q8IV32 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC71Q8IV32 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC71Q8IV32 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CCDC71Q8IV32 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.02□□□□□ -0.01
CCDC71Q8IV32 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC71Q8IV32 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CCDC71Q8IV32 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CCDC71Q8IV32 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC71Q8IV32 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC71Q8IV32 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.01□□□□□ -0.01
CCDC71Q8IV32 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC71Q8IV32 HMGA1P7-201ENST00000406908 502 ntBASIC15.01□□□□□ -0.01
CCDC71Q8IV32 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CCDC71Q8IV32 FAM58DP-201ENST00000428076 619 ntBASIC15.01□□□□□ -0.01
CCDC71Q8IV32 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC71Q8IV32 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC71Q8IV32 RN7SL589P-201ENST00000481268 310 ntBASIC15.01□□□□□ -0.01
CCDC71Q8IV32 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC71Q8IV32 AC093214.1-201ENST00000511688 1107 ntBASIC15.01□□□□□ -0.01
CCDC71Q8IV32 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC71Q8IV32 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC71Q8IV32 AL135744.1-201ENST00000565098 629 ntBASIC15.01□□□□□ -0.01
CCDC71Q8IV32 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.01□□□□□ -0.01
CCDC71Q8IV32 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC71Q8IV32 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC71Q8IV32 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.01□□□□□ -0.01
CCDC71Q8IV32 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC71Q8IV32 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC71Q8IV32 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CCDC71Q8IV32 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CCDC71Q8IV32 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC71Q8IV32 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC71Q8IV32 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC71Q8IV32 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC71Q8IV32 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC71Q8IV32 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC71Q8IV32 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC71Q8IV32 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CCDC71Q8IV32 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC71Q8IV32 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC71Q8IV32 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC71Q8IV32 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC71Q8IV32 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC71Q8IV32 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC71Q8IV32 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms