Protein–RNA interactions for Protein: Q86WV1

SKAP1, Src kinase-associated phosphoprotein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP1Q86WV1 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SKAP1Q86WV1 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SKAP1Q86WV1 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SKAP1Q86WV1 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC19.94■□□□□ 0.78
SKAP1Q86WV1 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SKAP1Q86WV1 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.94■□□□□ 0.78
SKAP1Q86WV1 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SKAP1Q86WV1 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SKAP1Q86WV1 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.94■□□□□ 0.78
SKAP1Q86WV1 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SKAP1Q86WV1 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SKAP1Q86WV1 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.94■□□□□ 0.78
SKAP1Q86WV1 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.94■□□□□ 0.78
SKAP1Q86WV1 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.94■□□□□ 0.78
SKAP1Q86WV1 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.94■□□□□ 0.78
SKAP1Q86WV1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.94■□□□□ 0.78
SKAP1Q86WV1 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.94■□□□□ 0.78
SKAP1Q86WV1 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.94■□□□□ 0.78
SKAP1Q86WV1 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.94■□□□□ 0.78
SKAP1Q86WV1 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.94■□□□□ 0.78
SKAP1Q86WV1 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.94■□□□□ 0.78
SKAP1Q86WV1 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SKAP1Q86WV1 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SKAP1Q86WV1 MARS-233ENST00000628866 2583 ntTSL 5 BASIC19.94■□□□□ 0.78
SKAP1Q86WV1 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SKAP1Q86WV1 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.94■□□□□ 0.78
SKAP1Q86WV1 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SKAP1Q86WV1 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.93■□□□□ 0.78
SKAP1Q86WV1 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.93■□□□□ 0.78
SKAP1Q86WV1 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SKAP1Q86WV1 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SKAP1Q86WV1 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.93■□□□□ 0.78
SKAP1Q86WV1 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.93■□□□□ 0.78
SKAP1Q86WV1 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.93■□□□□ 0.78
SKAP1Q86WV1 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
SKAP1Q86WV1 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC19.93■□□□□ 0.78
SKAP1Q86WV1 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.93■□□□□ 0.78
SKAP1Q86WV1 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SKAP1Q86WV1 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
SKAP1Q86WV1 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SKAP1Q86WV1 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.93■□□□□ 0.78
SKAP1Q86WV1 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SKAP1Q86WV1 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SKAP1Q86WV1 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SKAP1Q86WV1 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC19.92■□□□□ 0.78
SKAP1Q86WV1 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SKAP1Q86WV1 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SKAP1Q86WV1 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SKAP1Q86WV1 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SKAP1Q86WV1 C1R-202ENST00000536053 2347 ntTSL 2 BASIC19.92■□□□□ 0.78
SKAP1Q86WV1 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SKAP1Q86WV1 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SKAP1Q86WV1 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SKAP1Q86WV1 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SKAP1Q86WV1 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SKAP1Q86WV1 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.92■□□□□ 0.78
SKAP1Q86WV1 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SKAP1Q86WV1 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SKAP1Q86WV1 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC19.92■□□□□ 0.78
SKAP1Q86WV1 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.92■□□□□ 0.78
SKAP1Q86WV1 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.92■□□□□ 0.78
SKAP1Q86WV1 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.92■□□□□ 0.78
SKAP1Q86WV1 AP001005.1-201ENST00000571755 1248 ntBASIC19.92■□□□□ 0.78
SKAP1Q86WV1 AP002472.1-201ENST00000577490 586 ntBASIC19.92■□□□□ 0.78
SKAP1Q86WV1 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.92■□□□□ 0.78
SKAP1Q86WV1 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.92■□□□□ 0.78
SKAP1Q86WV1 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
SKAP1Q86WV1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SKAP1Q86WV1 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SKAP1Q86WV1 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SKAP1Q86WV1 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SKAP1Q86WV1 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC19.92■□□□□ 0.78
SKAP1Q86WV1 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SKAP1Q86WV1 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC19.92■□□□□ 0.78
SKAP1Q86WV1 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC19.92■□□□□ 0.78
SKAP1Q86WV1 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SKAP1Q86WV1 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SKAP1Q86WV1 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC19.92■□□□□ 0.78
SKAP1Q86WV1 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SKAP1Q86WV1 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SKAP1Q86WV1 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC19.91■□□□□ 0.78
SKAP1Q86WV1 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SKAP1Q86WV1 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC19.91■□□□□ 0.78
SKAP1Q86WV1 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SKAP1Q86WV1 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SKAP1Q86WV1 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SKAP1Q86WV1 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.91■□□□□ 0.78
SKAP1Q86WV1 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.91■□□□□ 0.78
SKAP1Q86WV1 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.91■□□□□ 0.78
SKAP1Q86WV1 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SKAP1Q86WV1 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.91■□□□□ 0.78
SKAP1Q86WV1 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SKAP1Q86WV1 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SKAP1Q86WV1 PMS2P7-201ENST00000506558 1336 ntBASIC19.91■□□□□ 0.78
SKAP1Q86WV1 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SKAP1Q86WV1 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SKAP1Q86WV1 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC19.91■□□□□ 0.78
SKAP1Q86WV1 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.91■□□□□ 0.78
SKAP1Q86WV1 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SKAP1Q86WV1 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms