Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 AL513190.1-201ENST00000621254 727 ntBASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATPAF1Q5TC12 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
ATPAF1Q5TC12 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.93□□□□□ -0.18
ATPAF1Q5TC12 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
ATPAF1Q5TC12 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATPAF1Q5TC12 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATPAF1Q5TC12 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.93□□□□□ -0.18
ATPAF1Q5TC12 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATPAF1Q5TC12 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATPAF1Q5TC12 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATPAF1Q5TC12 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATPAF1Q5TC12 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.93□□□□□ -0.18
ATPAF1Q5TC12 AC092474.2-201ENST00000424288 719 ntBASIC13.93□□□□□ -0.18
ATPAF1Q5TC12 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.93□□□□□ -0.18
ATPAF1Q5TC12 POU5F1P6-201ENST00000466990 990 ntBASIC13.93□□□□□ -0.18
ATPAF1Q5TC12 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.93□□□□□ -0.18
ATPAF1Q5TC12 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATPAF1Q5TC12 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.93□□□□□ -0.18
ATPAF1Q5TC12 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.93□□□□□ -0.18
ATPAF1Q5TC12 MTDHP5-201ENST00000598980 586 ntBASIC13.93□□□□□ -0.18
ATPAF1Q5TC12 AL009183.1-201ENST00000603760 355 ntBASIC13.93□□□□□ -0.18
ATPAF1Q5TC12 AC068137.2-201ENST00000605408 478 ntBASIC13.93□□□□□ -0.18
ATPAF1Q5TC12 AL031055.1-201ENST00000606362 631 ntBASIC13.93□□□□□ -0.18
ATPAF1Q5TC12 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.93□□□□□ -0.18
ATPAF1Q5TC12 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.93□□□□□ -0.18
ATPAF1Q5TC12 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATPAF1Q5TC12 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
ATPAF1Q5TC12 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATPAF1Q5TC12 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.93□□□□□ -0.18
ATPAF1Q5TC12 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATPAF1Q5TC12 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.93□□□□□ -0.18
ATPAF1Q5TC12 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATPAF1Q5TC12 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
ATPAF1Q5TC12 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.93□□□□□ -0.18
ATPAF1Q5TC12 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.93□□□□□ -0.18
ATPAF1Q5TC12 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATPAF1Q5TC12 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.93□□□□□ -0.18
ATPAF1Q5TC12 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.92□□□□□ -0.18
ATPAF1Q5TC12 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
ATPAF1Q5TC12 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATPAF1Q5TC12 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATPAF1Q5TC12 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATPAF1Q5TC12 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.92□□□□□ -0.18
ATPAF1Q5TC12 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
ATPAF1Q5TC12 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATPAF1Q5TC12 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
ATPAF1Q5TC12 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATPAF1Q5TC12 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATPAF1Q5TC12 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
ATPAF1Q5TC12 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.92□□□□□ -0.18
ATPAF1Q5TC12 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
ATPAF1Q5TC12 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ATPAF1Q5TC12 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ATPAF1Q5TC12 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ATPAF1Q5TC12 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
ATPAF1Q5TC12 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATPAF1Q5TC12 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms