Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.57■□□□□ 0.08
YBX1P67809 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.57■□□□□ 0.08
YBX1P67809 AC051619.7-201ENST00000568314 623 ntBASIC15.57■□□□□ 0.08
YBX1P67809 AC105021.1-202ENST00000570572 669 ntBASIC15.57■□□□□ 0.08
YBX1P67809 AC024267.1-201ENST00000582320 895 ntBASIC15.57■□□□□ 0.08
YBX1P67809 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.57■□□□□ 0.08
YBX1P67809 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
YBX1P67809 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.57■□□□□ 0.08
YBX1P67809 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
YBX1P67809 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
YBX1P67809 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.57■□□□□ 0.08
YBX1P67809 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
YBX1P67809 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
YBX1P67809 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.57■□□□□ 0.08
YBX1P67809 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
YBX1P67809 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
YBX1P67809 CICP13-201ENST00000422015 2789 ntBASIC15.57■□□□□ 0.08
YBX1P67809 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
YBX1P67809 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.57■□□□□ 0.08
YBX1P67809 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.57■□□□□ 0.08
YBX1P67809 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
YBX1P67809 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
YBX1P67809 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
YBX1P67809 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
YBX1P67809 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.57■□□□□ 0.08
YBX1P67809 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
YBX1P67809 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
YBX1P67809 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.56■□□□□ 0.08
YBX1P67809 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.56■□□□□ 0.08
YBX1P67809 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
YBX1P67809 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
YBX1P67809 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
YBX1P67809 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
YBX1P67809 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
YBX1P67809 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
YBX1P67809 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
YBX1P67809 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
YBX1P67809 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
YBX1P67809 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
YBX1P67809 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
YBX1P67809 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.56■□□□□ 0.08
YBX1P67809 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.56■□□□□ 0.08
YBX1P67809 AL645939.2-201ENST00000427340 991 ntBASIC15.56■□□□□ 0.08
YBX1P67809 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
YBX1P67809 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.56■□□□□ 0.08
YBX1P67809 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.56■□□□□ 0.08
YBX1P67809 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
YBX1P67809 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.56■□□□□ 0.08
YBX1P67809 AC027796.2-201ENST00000575326 344 ntBASIC15.56■□□□□ 0.08
YBX1P67809 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.56■□□□□ 0.08
YBX1P67809 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
YBX1P67809 AL133215.2-201ENST00000609242 977 ntBASIC15.56■□□□□ 0.08
YBX1P67809 AC093512.1-201ENST00000617969 520 ntBASIC15.56■□□□□ 0.08
YBX1P67809 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
YBX1P67809 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.56■□□□□ 0.08
YBX1P67809 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.56■□□□□ 0.08
YBX1P67809 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
YBX1P67809 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
YBX1P67809 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.56■□□□□ 0.08
YBX1P67809 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
YBX1P67809 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.56■□□□□ 0.08
YBX1P67809 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.56■□□□□ 0.08
YBX1P67809 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
YBX1P67809 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
YBX1P67809 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
YBX1P67809 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.56■□□□□ 0.08
YBX1P67809 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
YBX1P67809 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
YBX1P67809 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
YBX1P67809 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
YBX1P67809 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
YBX1P67809 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
YBX1P67809 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
YBX1P67809 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
YBX1P67809 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
YBX1P67809 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
YBX1P67809 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
YBX1P67809 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
YBX1P67809 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
YBX1P67809 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
YBX1P67809 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
YBX1P67809 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.55■□□□□ 0.08
YBX1P67809 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
YBX1P67809 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.55■□□□□ 0.08
YBX1P67809 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.55■□□□□ 0.08
YBX1P67809 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
YBX1P67809 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.55■□□□□ 0.08
YBX1P67809 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
YBX1P67809 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
YBX1P67809 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
YBX1P67809 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
YBX1P67809 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
YBX1P67809 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
YBX1P67809 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
YBX1P67809 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
YBX1P67809 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
YBX1P67809 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
YBX1P67809 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
YBX1P67809 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
YBX1P67809 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms