Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.6■□□□□ 0.25
H2AFXP16104 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2AFXP16104 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
H2AFXP16104 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2AFXP16104 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2AFXP16104 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2AFXP16104 AC079776.2-201ENST00000641154 1609 ntBASIC16.59■□□□□ 0.25
H2AFXP16104 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
H2AFXP16104 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2AFXP16104 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
H2AFXP16104 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
H2AFXP16104 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2AFXP16104 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
H2AFXP16104 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
H2AFXP16104 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2AFXP16104 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2AFXP16104 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.59■□□□□ 0.25
H2AFXP16104 AL645939.2-201ENST00000427340 991 ntBASIC16.59■□□□□ 0.25
H2AFXP16104 KRT18P38-201ENST00000449496 1282 ntBASIC16.59■□□□□ 0.25
H2AFXP16104 SLC25A6P2-201ENST00000497974 877 ntBASIC16.59■□□□□ 0.25
H2AFXP16104 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.59■□□□□ 0.25
H2AFXP16104 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.59■□□□□ 0.25
H2AFXP16104 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2AFXP16104 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
H2AFXP16104 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
H2AFXP16104 AP005901.3-202ENST00000581653 237 ntBASIC16.59■□□□□ 0.25
H2AFXP16104 AC090616.6-201ENST00000582640 721 ntBASIC16.59■□□□□ 0.25
H2AFXP16104 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.59■□□□□ 0.25
H2AFXP16104 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2AFXP16104 CR383656.2-201ENST00000548656 2254 ntBASIC16.59■□□□□ 0.25
H2AFXP16104 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2AFXP16104 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
H2AFXP16104 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
H2AFXP16104 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
H2AFXP16104 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
H2AFXP16104 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
H2AFXP16104 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2AFXP16104 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2AFXP16104 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
H2AFXP16104 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2AFXP16104 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.59■□□□□ 0.25
H2AFXP16104 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2AFXP16104 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC16.59■□□□□ 0.25
H2AFXP16104 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC16.59■□□□□ 0.25
H2AFXP16104 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
H2AFXP16104 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
H2AFXP16104 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
H2AFXP16104 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
H2AFXP16104 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
H2AFXP16104 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
H2AFXP16104 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
H2AFXP16104 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
H2AFXP16104 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
H2AFXP16104 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2AFXP16104 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2AFXP16104 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2AFXP16104 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2AFXP16104 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2AFXP16104 HCG4-201ENST00000418983 998 ntBASIC16.58■□□□□ 0.24
H2AFXP16104 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.58■□□□□ 0.24
H2AFXP16104 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.58■□□□□ 0.24
H2AFXP16104 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.58■□□□□ 0.24
H2AFXP16104 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
H2AFXP16104 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.58■□□□□ 0.24
H2AFXP16104 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2AFXP16104 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.58■□□□□ 0.24
H2AFXP16104 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.58■□□□□ 0.24
H2AFXP16104 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.58■□□□□ 0.24
H2AFXP16104 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.58■□□□□ 0.24
H2AFXP16104 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2AFXP16104 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
H2AFXP16104 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2AFXP16104 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2AFXP16104 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
H2AFXP16104 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
H2AFXP16104 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.58■□□□□ 0.24
H2AFXP16104 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
H2AFXP16104 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2AFXP16104 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
H2AFXP16104 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.58■□□□□ 0.24
H2AFXP16104 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC16.58■□□□□ 0.24
H2AFXP16104 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2AFXP16104 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2AFXP16104 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2AFXP16104 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
H2AFXP16104 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
H2AFXP16104 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
H2AFXP16104 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2AFXP16104 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2AFXP16104 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
H2AFXP16104 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2AFXP16104 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
H2AFXP16104 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.57■□□□□ 0.24
H2AFXP16104 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
H2AFXP16104 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
H2AFXP16104 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC16.57■□□□□ 0.24
H2AFXP16104 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
H2AFXP16104 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2AFXP16104 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2AFXP16104 AC018892.3-201ENST00000623986 2499 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms