Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.94□□□□□ -0.18
SHISA3A0PJX4 IGHV3-65-201ENST00000523210 341 ntBASIC13.94□□□□□ -0.18
SHISA3A0PJX4 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 AC107918.4-202ENST00000641623 219 ntBASIC13.94□□□□□ -0.18
SHISA3A0PJX4 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.94□□□□□ -0.18
SHISA3A0PJX4 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 PMS2P4-201ENST00000412466 1052 ntBASIC13.93□□□□□ -0.18
SHISA3A0PJX4 ATP5G2P1-201ENST00000433580 426 ntBASIC13.93□□□□□ -0.18
SHISA3A0PJX4 FAM185BP-201ENST00000443595 716 ntBASIC13.93□□□□□ -0.18
SHISA3A0PJX4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 AC008608.2-201ENST00000606089 416 ntBASIC13.93□□□□□ -0.18
SHISA3A0PJX4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 AL358472.4-201ENST00000633140 710 ntBASIC13.93□□□□□ -0.18
SHISA3A0PJX4 AP000550.4-202ENST00000639755 178 ntBASIC13.93□□□□□ -0.18
SHISA3A0PJX4 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHISA3A0PJX4 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms