Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.4■■□□□ 1.02
PCDHGB1Q9Y5G3 MIR219A2-201ENST00000608502 1504 ntBASIC21.4■■□□□ 1.02
PCDHGB1Q9Y5G3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGB1Q9Y5G3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGB1Q9Y5G3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
PCDHGB1Q9Y5G3 C9orf163-202ENST00000624034 2573 ntBASIC21.4■■□□□ 1.02
PCDHGB1Q9Y5G3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
PCDHGB1Q9Y5G3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
PCDHGB1Q9Y5G3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHGB1Q9Y5G3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGB1Q9Y5G3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.39■■□□□ 1.01
PCDHGB1Q9Y5G3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.39■■□□□ 1.01
PCDHGB1Q9Y5G3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGB1Q9Y5G3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGB1Q9Y5G3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGB1Q9Y5G3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGB1Q9Y5G3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGB1Q9Y5G3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
PCDHGB1Q9Y5G3 LINC01971-201ENST00000617888 1048 ntBASIC21.38■■□□□ 1.01
PCDHGB1Q9Y5G3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.38■■□□□ 1.01
PCDHGB1Q9Y5G3 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGB1Q9Y5G3 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGB1Q9Y5G3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
PCDHGB1Q9Y5G3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGB1Q9Y5G3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGB1Q9Y5G3 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGB1Q9Y5G3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGB1Q9Y5G3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGB1Q9Y5G3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGB1Q9Y5G3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGB1Q9Y5G3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDHGB1Q9Y5G3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGB1Q9Y5G3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGB1Q9Y5G3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGB1Q9Y5G3 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGB1Q9Y5G3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHGB1Q9Y5G3 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGB1Q9Y5G3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.36■■□□□ 1.01
PCDHGB1Q9Y5G3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGB1Q9Y5G3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHGB1Q9Y5G3 AL359504.2-201ENST00000605506 1601 ntBASIC21.36■■□□□ 1.01
PCDHGB1Q9Y5G3 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGB1Q9Y5G3 AL359258.2-201ENST00000564063 1566 ntBASIC21.36■■□□□ 1.01
PCDHGB1Q9Y5G3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
PCDHGB1Q9Y5G3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
PCDHGB1Q9Y5G3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGB1Q9Y5G3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGB1Q9Y5G3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
PCDHGB1Q9Y5G3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGB1Q9Y5G3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHGB1Q9Y5G3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHGB1Q9Y5G3 DUX4L13-201ENST00000554103 1267 ntBASIC21.35■■□□□ 1.01
PCDHGB1Q9Y5G3 DUX4L15-201ENST00000611059 1267 ntBASIC21.35■■□□□ 1.01
PCDHGB1Q9Y5G3 DUX4L23-201ENST00000615195 1269 ntBASIC21.35■■□□□ 1.01
PCDHGB1Q9Y5G3 DUX4L24-201ENST00000617576 1269 ntBASIC21.35■■□□□ 1.01
PCDHGB1Q9Y5G3 DUX4L22-201ENST00000618238 1269 ntBASIC21.35■■□□□ 1.01
PCDHGB1Q9Y5G3 DUX4L20-201ENST00000619712 1269 ntBASIC21.35■■□□□ 1.01
PCDHGB1Q9Y5G3 DUX4L21-201ENST00000622058 1269 ntBASIC21.35■■□□□ 1.01
PCDHGB1Q9Y5G3 DUX4L10-201ENST00000622460 1267 ntBASIC21.35■■□□□ 1.01
PCDHGB1Q9Y5G3 DUX4L25-201ENST00000624915 1269 ntBASIC21.35■■□□□ 1.01
PCDHGB1Q9Y5G3 ABCB10P4-201ENST00000566803 2184 ntBASIC21.35■■□□□ 1.01
PCDHGB1Q9Y5G3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGB1Q9Y5G3 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGB1Q9Y5G3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDHGB1Q9Y5G3 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGB1Q9Y5G3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGB1Q9Y5G3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGB1Q9Y5G3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
PCDHGB1Q9Y5G3 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGB1Q9Y5G3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PCDHGB1Q9Y5G3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PCDHGB1Q9Y5G3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.33■■□□□ 1
PCDHGB1Q9Y5G3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.33■■□□□ 1
PCDHGB1Q9Y5G3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
PCDHGB1Q9Y5G3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
PCDHGB1Q9Y5G3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDHGB1Q9Y5G3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGB1Q9Y5G3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGB1Q9Y5G3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGB1Q9Y5G3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDHGB1Q9Y5G3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.32■■□□□ 1
PCDHGB1Q9Y5G3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGB1Q9Y5G3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGB1Q9Y5G3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.31■■□□□ 1
PCDHGB1Q9Y5G3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.31■■□□□ 1
PCDHGB1Q9Y5G3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGB1Q9Y5G3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.31■■□□□ 1
PCDHGB1Q9Y5G3 AC016575.1-201ENST00000607026 382 ntBASIC21.31■■□□□ 1
PCDHGB1Q9Y5G3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHGB1Q9Y5G3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGB1Q9Y5G3 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGB1Q9Y5G3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGB1Q9Y5G3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.3■■□□□ 1
PCDHGB1Q9Y5G3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.3■■□□□ 1
PCDHGB1Q9Y5G3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHGB1Q9Y5G3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.3■■□□□ 1
PCDHGB1Q9Y5G3 HSD17B1P1-201ENST00000590052 955 ntBASIC21.3■■□□□ 1
PCDHGB1Q9Y5G3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.3■■□□□ 1
PCDHGB1Q9Y5G3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHGB1Q9Y5G3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms