Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CHMP2BQ9UQN3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.83■■□□□ 1.4
CHMP2BQ9UQN3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
CHMP2BQ9UQN3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHMP2BQ9UQN3 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHMP2BQ9UQN3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.82■■□□□ 1.4
CHMP2BQ9UQN3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHMP2BQ9UQN3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.82■■□□□ 1.4
CHMP2BQ9UQN3 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.82■■□□□ 1.4
CHMP2BQ9UQN3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
CHMP2BQ9UQN3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.82■■□□□ 1.4
CHMP2BQ9UQN3 AC007029.1-201ENST00000604183 313 ntBASIC23.82■■□□□ 1.4
CHMP2BQ9UQN3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
CHMP2BQ9UQN3 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHMP2BQ9UQN3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.82■■□□□ 1.4
CHMP2BQ9UQN3 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHMP2BQ9UQN3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CHMP2BQ9UQN3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHMP2BQ9UQN3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHMP2BQ9UQN3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CHMP2BQ9UQN3 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHMP2BQ9UQN3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.8■■□□□ 1.4
CHMP2BQ9UQN3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.8■■□□□ 1.4
CHMP2BQ9UQN3 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.8■■□□□ 1.4
CHMP2BQ9UQN3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.8■■□□□ 1.4
CHMP2BQ9UQN3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHMP2BQ9UQN3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CHMP2BQ9UQN3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.8■■□□□ 1.4
CHMP2BQ9UQN3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHMP2BQ9UQN3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CHMP2BQ9UQN3 AC004812.2-201ENST00000611079 2094 ntBASIC23.79■■□□□ 1.4
CHMP2BQ9UQN3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CHMP2BQ9UQN3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
CHMP2BQ9UQN3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.79■■□□□ 1.4
CHMP2BQ9UQN3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.79■■□□□ 1.4
CHMP2BQ9UQN3 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHMP2BQ9UQN3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHMP2BQ9UQN3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.79■■□□□ 1.4
CHMP2BQ9UQN3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHMP2BQ9UQN3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CHMP2BQ9UQN3 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHMP2BQ9UQN3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHMP2BQ9UQN3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHMP2BQ9UQN3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
CHMP2BQ9UQN3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHMP2BQ9UQN3 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
CHMP2BQ9UQN3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHMP2BQ9UQN3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHMP2BQ9UQN3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHMP2BQ9UQN3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHMP2BQ9UQN3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHMP2BQ9UQN3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CHMP2BQ9UQN3 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.76■■□□□ 1.39
CHMP2BQ9UQN3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
CHMP2BQ9UQN3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.76■■□□□ 1.39
CHMP2BQ9UQN3 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CHMP2BQ9UQN3 RAP2CP1-202ENST00000605179 643 ntBASIC23.75■■□□□ 1.39
CHMP2BQ9UQN3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHMP2BQ9UQN3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CHMP2BQ9UQN3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.74■■□□□ 1.39
CHMP2BQ9UQN3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.74■■□□□ 1.39
CHMP2BQ9UQN3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.74■■□□□ 1.39
CHMP2BQ9UQN3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CHMP2BQ9UQN3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.74■■□□□ 1.39
CHMP2BQ9UQN3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CHMP2BQ9UQN3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
CHMP2BQ9UQN3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CHMP2BQ9UQN3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CHMP2BQ9UQN3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.73■■□□□ 1.39
CHMP2BQ9UQN3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CHMP2BQ9UQN3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CHMP2BQ9UQN3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CHMP2BQ9UQN3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.72■■□□□ 1.39
CHMP2BQ9UQN3 ABCB10P4-201ENST00000566803 2184 ntBASIC23.72■■□□□ 1.39
CHMP2BQ9UQN3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.72■■□□□ 1.39
CHMP2BQ9UQN3 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.72■■□□□ 1.39
CHMP2BQ9UQN3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CHMP2BQ9UQN3 HLA-L-211ENST00000482052 1765 ntBASIC23.72■■□□□ 1.39
CHMP2BQ9UQN3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
CHMP2BQ9UQN3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CHMP2BQ9UQN3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.72■■□□□ 1.39
CHMP2BQ9UQN3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHMP2BQ9UQN3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.71■■□□□ 1.39
CHMP2BQ9UQN3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHMP2BQ9UQN3 FOXO3B-201ENST00000395675 1928 ntBASIC23.71■■□□□ 1.39
CHMP2BQ9UQN3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
CHMP2BQ9UQN3 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.7■■□□□ 1.38
CHMP2BQ9UQN3 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.7■■□□□ 1.38
CHMP2BQ9UQN3 GPX1-201ENST00000419349 1106 ntBASIC23.7■■□□□ 1.38
CHMP2BQ9UQN3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.7■■□□□ 1.38
CHMP2BQ9UQN3 AC026202.3-201ENST00000600805 1127 ntBASIC23.7■■□□□ 1.38
CHMP2BQ9UQN3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CHMP2BQ9UQN3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CHMP2BQ9UQN3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.69■■□□□ 1.38
CHMP2BQ9UQN3 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHMP2BQ9UQN3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CHMP2BQ9UQN3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.69■■□□□ 1.38
CHMP2BQ9UQN3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
CHMP2BQ9UQN3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.69■■□□□ 1.38
CHMP2BQ9UQN3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms