Protein–RNA interactions for Protein: Q9NQC8

IFT46, Intraflagellar transport protein 46 homolog, humanhuman

Predictions only

Length 304 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46Q9NQC8 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IFT46Q9NQC8 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IFT46Q9NQC8 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IFT46Q9NQC8 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IFT46Q9NQC8 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFT46Q9NQC8 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFT46Q9NQC8 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFT46Q9NQC8 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFT46Q9NQC8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
IFT46Q9NQC8 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFT46Q9NQC8 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.04■□□□□ 0.8
IFT46Q9NQC8 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
IFT46Q9NQC8 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.04■□□□□ 0.8
IFT46Q9NQC8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.04■□□□□ 0.8
IFT46Q9NQC8 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.04■□□□□ 0.8
IFT46Q9NQC8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFT46Q9NQC8 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFT46Q9NQC8 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.04■□□□□ 0.8
IFT46Q9NQC8 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
IFT46Q9NQC8 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFT46Q9NQC8 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFT46Q9NQC8 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
IFT46Q9NQC8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.04■□□□□ 0.8
IFT46Q9NQC8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.04■□□□□ 0.8
IFT46Q9NQC8 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFT46Q9NQC8 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
IFT46Q9NQC8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
IFT46Q9NQC8 LINC01971-201ENST00000617888 1048 ntBASIC20.03■□□□□ 0.8
IFT46Q9NQC8 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
IFT46Q9NQC8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
IFT46Q9NQC8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
IFT46Q9NQC8 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
IFT46Q9NQC8 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.02■□□□□ 0.8
IFT46Q9NQC8 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
IFT46Q9NQC8 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
IFT46Q9NQC8 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
IFT46Q9NQC8 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
IFT46Q9NQC8 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.02■□□□□ 0.8
IFT46Q9NQC8 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
IFT46Q9NQC8 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
IFT46Q9NQC8 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
IFT46Q9NQC8 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.01■□□□□ 0.79
IFT46Q9NQC8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
IFT46Q9NQC8 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
IFT46Q9NQC8 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
IFT46Q9NQC8 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.01■□□□□ 0.79
IFT46Q9NQC8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.01■□□□□ 0.79
IFT46Q9NQC8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.01■□□□□ 0.79
IFT46Q9NQC8 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.01■□□□□ 0.79
IFT46Q9NQC8 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IFT46Q9NQC8 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IFT46Q9NQC8 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
IFT46Q9NQC8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.01■□□□□ 0.79
IFT46Q9NQC8 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
IFT46Q9NQC8 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20■□□□□ 0.79
IFT46Q9NQC8 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IFT46Q9NQC8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
IFT46Q9NQC8 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
IFT46Q9NQC8 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
IFT46Q9NQC8 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20■□□□□ 0.79
IFT46Q9NQC8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IFT46Q9NQC8 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IFT46Q9NQC8 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20■□□□□ 0.79
IFT46Q9NQC8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IFT46Q9NQC8 DUX4L13-201ENST00000554103 1267 ntBASIC20■□□□□ 0.79
IFT46Q9NQC8 DUX4L15-201ENST00000611059 1267 ntBASIC20■□□□□ 0.79
IFT46Q9NQC8 DUX4L23-201ENST00000615195 1269 ntBASIC20■□□□□ 0.79
IFT46Q9NQC8 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20■□□□□ 0.79
IFT46Q9NQC8 DUX4L24-201ENST00000617576 1269 ntBASIC20■□□□□ 0.79
IFT46Q9NQC8 DUX4L22-201ENST00000618238 1269 ntBASIC20■□□□□ 0.79
IFT46Q9NQC8 DUX4L20-201ENST00000619712 1269 ntBASIC20■□□□□ 0.79
IFT46Q9NQC8 DUX4L21-201ENST00000622058 1269 ntBASIC20■□□□□ 0.79
IFT46Q9NQC8 DUX4L10-201ENST00000622460 1267 ntBASIC20■□□□□ 0.79
IFT46Q9NQC8 DUX4L25-201ENST00000624915 1269 ntBASIC20■□□□□ 0.79
IFT46Q9NQC8 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20■□□□□ 0.79
IFT46Q9NQC8 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20■□□□□ 0.79
IFT46Q9NQC8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
IFT46Q9NQC8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IFT46Q9NQC8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20■□□□□ 0.79
IFT46Q9NQC8 DUSP8P5-201ENST00000422884 1815 ntBASIC19.99■□□□□ 0.79
IFT46Q9NQC8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
IFT46Q9NQC8 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
IFT46Q9NQC8 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
IFT46Q9NQC8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
IFT46Q9NQC8 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
IFT46Q9NQC8 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
IFT46Q9NQC8 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
IFT46Q9NQC8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
IFT46Q9NQC8 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
IFT46Q9NQC8 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.99■□□□□ 0.79
IFT46Q9NQC8 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
IFT46Q9NQC8 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
IFT46Q9NQC8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
IFT46Q9NQC8 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
IFT46Q9NQC8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
IFT46Q9NQC8 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
IFT46Q9NQC8 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.98■□□□□ 0.79
IFT46Q9NQC8 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
IFT46Q9NQC8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
IFT46Q9NQC8 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms