Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 LONRF2P2-201ENST00000439212 571 ntBASIC29.58■■■□□ 2.33
CHMP4BQ9H444 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC29.58■■■□□ 2.33
CHMP4BQ9H444 SSSCA1-AS1-201ENST00000567594 614 ntBASIC29.58■■■□□ 2.33
CHMP4BQ9H444 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
CHMP4BQ9H444 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC29.57■■■□□ 2.32
CHMP4BQ9H444 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC29.57■■■□□ 2.32
CHMP4BQ9H444 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC29.57■■■□□ 2.32
CHMP4BQ9H444 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC29.57■■■□□ 2.32
CHMP4BQ9H444 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CHMP4BQ9H444 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CHMP4BQ9H444 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CHMP4BQ9H444 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC29.56■■■□□ 2.32
CHMP4BQ9H444 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC29.56■■■□□ 2.32
CHMP4BQ9H444 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CHMP4BQ9H444 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CHMP4BQ9H444 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CHMP4BQ9H444 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CHMP4BQ9H444 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CHMP4BQ9H444 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC29.56■■■□□ 2.32
CHMP4BQ9H444 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CHMP4BQ9H444 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC29.55■■■□□ 2.32
CHMP4BQ9H444 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC29.55■■■□□ 2.32
CHMP4BQ9H444 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CHMP4BQ9H444 AC019171.1-201ENST00000601251 1056 ntBASIC29.55■■■□□ 2.32
CHMP4BQ9H444 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CHMP4BQ9H444 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
CHMP4BQ9H444 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
CHMP4BQ9H444 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CHMP4BQ9H444 AC093323.1-202ENST00000635031 2045 ntBASIC29.54■■■□□ 2.32
CHMP4BQ9H444 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CHMP4BQ9H444 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
CHMP4BQ9H444 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
CHMP4BQ9H444 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC29.54■■■□□ 2.32
CHMP4BQ9H444 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CHMP4BQ9H444 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC29.54■■■□□ 2.32
CHMP4BQ9H444 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CHMP4BQ9H444 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC29.53■■■□□ 2.32
CHMP4BQ9H444 PREB-202ENST00000406567 1910 ntTSL 5 BASIC29.53■■■□□ 2.32
CHMP4BQ9H444 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CHMP4BQ9H444 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
CHMP4BQ9H444 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CHMP4BQ9H444 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC29.53■■■□□ 2.32
CHMP4BQ9H444 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC29.53■■■□□ 2.32
CHMP4BQ9H444 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC29.53■■■□□ 2.32
CHMP4BQ9H444 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC29.53■■■□□ 2.32
CHMP4BQ9H444 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
CHMP4BQ9H444 LINC00543-201ENST00000567234 1845 ntBASIC29.52■■■□□ 2.32
CHMP4BQ9H444 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC29.52■■■□□ 2.32
CHMP4BQ9H444 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CHMP4BQ9H444 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
CHMP4BQ9H444 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
CHMP4BQ9H444 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC29.52■■■□□ 2.32
CHMP4BQ9H444 MTX2-204ENST00000443241 799 ntTSL 3 BASIC29.52■■■□□ 2.32
CHMP4BQ9H444 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC29.52■■■□□ 2.32
CHMP4BQ9H444 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC29.51■■■□□ 2.32
CHMP4BQ9H444 LINC01124-201ENST00000409786 2117 ntBASIC29.51■■■□□ 2.32
CHMP4BQ9H444 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC29.51■■■□□ 2.31
CHMP4BQ9H444 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
CHMP4BQ9H444 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
CHMP4BQ9H444 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
CHMP4BQ9H444 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CHMP4BQ9H444 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC29.51■■■□□ 2.31
CHMP4BQ9H444 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC29.5■■■□□ 2.31
CHMP4BQ9H444 AC139795.1-202ENST00000500444 432 ntBASIC29.5■■■□□ 2.31
CHMP4BQ9H444 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CHMP4BQ9H444 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC29.49■■■□□ 2.31
CHMP4BQ9H444 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC29.49■■■□□ 2.31
CHMP4BQ9H444 AC022616.5-201ENST00000518796 181 ntBASIC29.49■■■□□ 2.31
CHMP4BQ9H444 AC074183.2-201ENST00000623112 922 ntBASIC29.49■■■□□ 2.31
CHMP4BQ9H444 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
CHMP4BQ9H444 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CHMP4BQ9H444 AC090877.2-201ENST00000558441 1738 ntBASIC29.48■■■□□ 2.31
CHMP4BQ9H444 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CHMP4BQ9H444 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
CHMP4BQ9H444 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CHMP4BQ9H444 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC29.48■■■□□ 2.31
CHMP4BQ9H444 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CHMP4BQ9H444 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
CHMP4BQ9H444 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC29.47■■■□□ 2.31
CHMP4BQ9H444 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CHMP4BQ9H444 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CHMP4BQ9H444 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CHMP4BQ9H444 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC29.46■■■□□ 2.31
CHMP4BQ9H444 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC29.46■■■□□ 2.31
CHMP4BQ9H444 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CHMP4BQ9H444 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CHMP4BQ9H444 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CHMP4BQ9H444 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC29.46■■■□□ 2.31
CHMP4BQ9H444 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
CHMP4BQ9H444 ATP5G2P3-201ENST00000429083 425 ntBASIC29.45■■■□□ 2.31
CHMP4BQ9H444 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
CHMP4BQ9H444 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC29.45■■■□□ 2.31
CHMP4BQ9H444 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CHMP4BQ9H444 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CHMP4BQ9H444 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC29.44■■■□□ 2.3
CHMP4BQ9H444 DUX4L18-201ENST00000553347 1267 ntBASIC29.44■■■□□ 2.3
CHMP4BQ9H444 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC29.44■■■□□ 2.3
CHMP4BQ9H444 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CHMP4BQ9H444 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC29.44■■■□□ 2.3
CHMP4BQ9H444 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC29.44■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms