Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.6■■□□□ 1.21
SLC46A1Q96NT5 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC22.6■■□□□ 1.21
SLC46A1Q96NT5 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SLC46A1Q96NT5 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SLC46A1Q96NT5 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SLC46A1Q96NT5 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.59■■□□□ 1.21
SLC46A1Q96NT5 AC096631.2-201ENST00000436136 790 ntBASIC22.59■■□□□ 1.21
SLC46A1Q96NT5 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.59■■□□□ 1.21
SLC46A1Q96NT5 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.59■■□□□ 1.21
SLC46A1Q96NT5 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SLC46A1Q96NT5 MIR4466-201ENST00000606121 54 ntBASIC22.59■■□□□ 1.21
SLC46A1Q96NT5 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.59■■□□□ 1.21
SLC46A1Q96NT5 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
SLC46A1Q96NT5 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SLC46A1Q96NT5 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.59■■□□□ 1.21
SLC46A1Q96NT5 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.59■■□□□ 1.21
SLC46A1Q96NT5 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.59■■□□□ 1.21
SLC46A1Q96NT5 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SLC46A1Q96NT5 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SLC46A1Q96NT5 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SLC46A1Q96NT5 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
SLC46A1Q96NT5 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.58■■□□□ 1.21
SLC46A1Q96NT5 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.58■■□□□ 1.21
SLC46A1Q96NT5 AC133561.4-201ENST00000566112 224 ntBASIC22.58■■□□□ 1.21
SLC46A1Q96NT5 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SLC46A1Q96NT5 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
SLC46A1Q96NT5 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SLC46A1Q96NT5 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC46A1Q96NT5 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.57■■□□□ 1.2
SLC46A1Q96NT5 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC46A1Q96NT5 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.57■■□□□ 1.2
SLC46A1Q96NT5 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC46A1Q96NT5 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.57■■□□□ 1.2
SLC46A1Q96NT5 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC46A1Q96NT5 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC46A1Q96NT5 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.56■■□□□ 1.2
SLC46A1Q96NT5 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.56■■□□□ 1.2
SLC46A1Q96NT5 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SLC46A1Q96NT5 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.56■■□□□ 1.2
SLC46A1Q96NT5 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SLC46A1Q96NT5 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SLC46A1Q96NT5 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SLC46A1Q96NT5 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SLC46A1Q96NT5 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.55■■□□□ 1.2
SLC46A1Q96NT5 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.55■■□□□ 1.2
SLC46A1Q96NT5 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SLC46A1Q96NT5 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.55■■□□□ 1.2
SLC46A1Q96NT5 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC46A1Q96NT5 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC46A1Q96NT5 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC46A1Q96NT5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.54■■□□□ 1.2
SLC46A1Q96NT5 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
SLC46A1Q96NT5 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.54■■□□□ 1.2
SLC46A1Q96NT5 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SLC46A1Q96NT5 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SLC46A1Q96NT5 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SLC46A1Q96NT5 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
SLC46A1Q96NT5 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SLC46A1Q96NT5 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.52■■□□□ 1.2
SLC46A1Q96NT5 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SLC46A1Q96NT5 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SLC46A1Q96NT5 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
SLC46A1Q96NT5 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
SLC46A1Q96NT5 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SLC46A1Q96NT5 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SLC46A1Q96NT5 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.51■■□□□ 1.19
SLC46A1Q96NT5 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.51■■□□□ 1.19
SLC46A1Q96NT5 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.51■■□□□ 1.19
SLC46A1Q96NT5 AL512631.2-201ENST00000604634 923 ntBASIC22.51■■□□□ 1.19
SLC46A1Q96NT5 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.51■■□□□ 1.19
SLC46A1Q96NT5 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SLC46A1Q96NT5 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SLC46A1Q96NT5 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.5■■□□□ 1.19
SLC46A1Q96NT5 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.5■■□□□ 1.19
SLC46A1Q96NT5 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.5■■□□□ 1.19
SLC46A1Q96NT5 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SLC46A1Q96NT5 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SLC46A1Q96NT5 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.49■■□□□ 1.19
SLC46A1Q96NT5 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
SLC46A1Q96NT5 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SLC46A1Q96NT5 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SLC46A1Q96NT5 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SLC46A1Q96NT5 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SLC46A1Q96NT5 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
SLC46A1Q96NT5 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.48■■□□□ 1.19
SLC46A1Q96NT5 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.48■■□□□ 1.19
SLC46A1Q96NT5 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
SLC46A1Q96NT5 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.48■■□□□ 1.19
SLC46A1Q96NT5 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
SLC46A1Q96NT5 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
SLC46A1Q96NT5 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.48■■□□□ 1.19
SLC46A1Q96NT5 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SLC46A1Q96NT5 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SLC46A1Q96NT5 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.47■■□□□ 1.19
SLC46A1Q96NT5 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.47■■□□□ 1.19
SLC46A1Q96NT5 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SLC46A1Q96NT5 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.47■■□□□ 1.19
SLC46A1Q96NT5 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.47■■□□□ 1.19
SLC46A1Q96NT5 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.47■■□□□ 1.19
SLC46A1Q96NT5 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms