Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 MTX2-204ENST00000443241 799 ntTSL 3 BASIC26.89■■□□□ 1.9
TNFRSF25Q93038 AC139795.1-202ENST00000500444 432 ntBASIC26.89■■□□□ 1.9
TNFRSF25Q93038 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
TNFRSF25Q93038 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
TNFRSF25Q93038 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
TNFRSF25Q93038 AL139125.2-201ENST00000623134 1869 ntBASIC26.88■■□□□ 1.89
TNFRSF25Q93038 BEX3-202ENST00000372634 753 ntTSL 2 BASIC26.88■■□□□ 1.89
TNFRSF25Q93038 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC26.88■■□□□ 1.89
TNFRSF25Q93038 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.88■■□□□ 1.89
TNFRSF25Q93038 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
TNFRSF25Q93038 AL592295.1-201ENST00000400984 884 ntBASIC26.87■■□□□ 1.89
TNFRSF25Q93038 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
TNFRSF25Q93038 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC26.87■■□□□ 1.89
TNFRSF25Q93038 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC26.87■■□□□ 1.89
TNFRSF25Q93038 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC26.87■■□□□ 1.89
TNFRSF25Q93038 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
TNFRSF25Q93038 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.87■■□□□ 1.89
TNFRSF25Q93038 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
TNFRSF25Q93038 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
TNFRSF25Q93038 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
TNFRSF25Q93038 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.86■■□□□ 1.89
TNFRSF25Q93038 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC26.86■■□□□ 1.89
TNFRSF25Q93038 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC26.86■■□□□ 1.89
TNFRSF25Q93038 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
TNFRSF25Q93038 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
TNFRSF25Q93038 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
TNFRSF25Q93038 AC010980.1-201ENST00000587192 1142 ntBASIC26.86■■□□□ 1.89
TNFRSF25Q93038 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC26.86■■□□□ 1.89
TNFRSF25Q93038 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
TNFRSF25Q93038 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
TNFRSF25Q93038 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
TNFRSF25Q93038 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
TNFRSF25Q93038 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC26.85■■□□□ 1.89
TNFRSF25Q93038 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC26.85■■□□□ 1.89
TNFRSF25Q93038 AC074183.2-201ENST00000623112 922 ntBASIC26.85■■□□□ 1.89
TNFRSF25Q93038 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
TNFRSF25Q93038 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
TNFRSF25Q93038 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.84■■□□□ 1.89
TNFRSF25Q93038 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
TNFRSF25Q93038 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
TNFRSF25Q93038 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC26.84■■□□□ 1.89
TNFRSF25Q93038 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC26.84■■□□□ 1.89
TNFRSF25Q93038 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
TNFRSF25Q93038 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC26.84■■□□□ 1.89
TNFRSF25Q93038 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC26.84■■□□□ 1.89
TNFRSF25Q93038 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC26.84■■□□□ 1.89
TNFRSF25Q93038 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC26.84■■□□□ 1.89
TNFRSF25Q93038 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
TNFRSF25Q93038 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
TNFRSF25Q93038 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.83■■□□□ 1.89
TNFRSF25Q93038 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
TNFRSF25Q93038 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
TNFRSF25Q93038 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
TNFRSF25Q93038 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
TNFRSF25Q93038 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC26.83■■□□□ 1.88
TNFRSF25Q93038 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC26.83■■□□□ 1.88
TNFRSF25Q93038 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.82■■□□□ 1.88
TNFRSF25Q93038 EED-207ENST00000528180 1745 ntTSL 5 BASIC26.82■■□□□ 1.88
TNFRSF25Q93038 AC135731.1-201ENST00000569415 2548 ntBASIC26.82■■□□□ 1.88
TNFRSF25Q93038 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
TNFRSF25Q93038 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
TNFRSF25Q93038 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC26.82■■□□□ 1.88
TNFRSF25Q93038 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC26.82■■□□□ 1.88
TNFRSF25Q93038 PREB-202ENST00000406567 1910 ntTSL 5 BASIC26.82■■□□□ 1.88
TNFRSF25Q93038 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
TNFRSF25Q93038 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
TNFRSF25Q93038 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
TNFRSF25Q93038 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.81■■□□□ 1.88
TNFRSF25Q93038 BHLHE23-202ENST00000612929 1109 ntBASIC26.81■■□□□ 1.88
TNFRSF25Q93038 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
TNFRSF25Q93038 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
TNFRSF25Q93038 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.8■■□□□ 1.88
TNFRSF25Q93038 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
TNFRSF25Q93038 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
TNFRSF25Q93038 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
TNFRSF25Q93038 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
TNFRSF25Q93038 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.79■■□□□ 1.88
TNFRSF25Q93038 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
TNFRSF25Q93038 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
TNFRSF25Q93038 AC090877.2-201ENST00000558441 1738 ntBASIC26.79■■□□□ 1.88
TNFRSF25Q93038 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
TNFRSF25Q93038 AC103834.1-201ENST00000520383 144 ntBASIC26.78■■□□□ 1.88
TNFRSF25Q93038 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC26.78■■□□□ 1.88
TNFRSF25Q93038 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
TNFRSF25Q93038 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
TNFRSF25Q93038 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
TNFRSF25Q93038 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC26.77■■□□□ 1.88
TNFRSF25Q93038 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
TNFRSF25Q93038 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
TNFRSF25Q93038 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC26.77■■□□□ 1.88
TNFRSF25Q93038 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.77■■□□□ 1.88
TNFRSF25Q93038 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
TNFRSF25Q93038 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
TNFRSF25Q93038 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
TNFRSF25Q93038 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
TNFRSF25Q93038 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC26.76■■□□□ 1.87
TNFRSF25Q93038 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.76■■□□□ 1.87
TNFRSF25Q93038 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
TNFRSF25Q93038 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
TNFRSF25Q93038 AC022616.5-201ENST00000518796 181 ntBASIC26.75■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms