Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
TRUB1Q8WWH5 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.44■■□□□ 1.02
TRUB1Q8WWH5 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.44■■□□□ 1.02
TRUB1Q8WWH5 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.44■■□□□ 1.02
TRUB1Q8WWH5 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRUB1Q8WWH5 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRUB1Q8WWH5 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRUB1Q8WWH5 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.44■■□□□ 1.02
TRUB1Q8WWH5 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRUB1Q8WWH5 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRUB1Q8WWH5 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRUB1Q8WWH5 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRUB1Q8WWH5 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRUB1Q8WWH5 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRUB1Q8WWH5 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.43■■□□□ 1.02
TRUB1Q8WWH5 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRUB1Q8WWH5 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.43■■□□□ 1.02
TRUB1Q8WWH5 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRUB1Q8WWH5 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRUB1Q8WWH5 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
TRUB1Q8WWH5 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRUB1Q8WWH5 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRUB1Q8WWH5 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRUB1Q8WWH5 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.42■■□□□ 1.02
TRUB1Q8WWH5 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TRUB1Q8WWH5 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRUB1Q8WWH5 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRUB1Q8WWH5 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
TRUB1Q8WWH5 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
TRUB1Q8WWH5 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRUB1Q8WWH5 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
TRUB1Q8WWH5 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRUB1Q8WWH5 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.41■■□□□ 1.02
TRUB1Q8WWH5 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRUB1Q8WWH5 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRUB1Q8WWH5 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRUB1Q8WWH5 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRUB1Q8WWH5 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRUB1Q8WWH5 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRUB1Q8WWH5 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.4■■□□□ 1.02
TRUB1Q8WWH5 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.4■■□□□ 1.02
TRUB1Q8WWH5 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRUB1Q8WWH5 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
TRUB1Q8WWH5 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRUB1Q8WWH5 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRUB1Q8WWH5 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRUB1Q8WWH5 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.39■■□□□ 1.01
TRUB1Q8WWH5 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.39■■□□□ 1.01
TRUB1Q8WWH5 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRUB1Q8WWH5 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
TRUB1Q8WWH5 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRUB1Q8WWH5 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
TRUB1Q8WWH5 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
TRUB1Q8WWH5 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRUB1Q8WWH5 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRUB1Q8WWH5 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRUB1Q8WWH5 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRUB1Q8WWH5 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
TRUB1Q8WWH5 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
TRUB1Q8WWH5 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRUB1Q8WWH5 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
TRUB1Q8WWH5 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRUB1Q8WWH5 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRUB1Q8WWH5 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRUB1Q8WWH5 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRUB1Q8WWH5 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.37■■□□□ 1.01
TRUB1Q8WWH5 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRUB1Q8WWH5 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
TRUB1Q8WWH5 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
TRUB1Q8WWH5 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.36■■□□□ 1.01
TRUB1Q8WWH5 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
TRUB1Q8WWH5 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.36■■□□□ 1.01
TRUB1Q8WWH5 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRUB1Q8WWH5 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRUB1Q8WWH5 AC126177.7-201ENST00000547904 679 ntBASIC21.36■■□□□ 1.01
TRUB1Q8WWH5 LINC00565-201ENST00000562710 2331 ntBASIC21.36■■□□□ 1.01
TRUB1Q8WWH5 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
TRUB1Q8WWH5 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRUB1Q8WWH5 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRUB1Q8WWH5 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRUB1Q8WWH5 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRUB1Q8WWH5 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.35■■□□□ 1.01
TRUB1Q8WWH5 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRUB1Q8WWH5 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.35■■□□□ 1.01
TRUB1Q8WWH5 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.35■■□□□ 1.01
TRUB1Q8WWH5 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
TRUB1Q8WWH5 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRUB1Q8WWH5 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRUB1Q8WWH5 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRUB1Q8WWH5 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.34■■□□□ 1.01
TRUB1Q8WWH5 HLA-V-202ENST00000446817 847 ntBASIC21.34■■□□□ 1.01
TRUB1Q8WWH5 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.34■■□□□ 1.01
TRUB1Q8WWH5 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRUB1Q8WWH5 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.34■■□□□ 1.01
TRUB1Q8WWH5 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRUB1Q8WWH5 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.33■■□□□ 1.01
TRUB1Q8WWH5 AC004812.2-201ENST00000611079 2094 ntBASIC21.33■■□□□ 1.01
TRUB1Q8WWH5 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.33■■□□□ 1.01
TRUB1Q8WWH5 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRUB1Q8WWH5 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms