Protein–RNA interactions for Protein: Q8TF05

PPP4R1, Serine/threonine-protein phosphatase 4 regulatory subunit 1, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1Q8TF05 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PPP4R1Q8TF05 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PPP4R1Q8TF05 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.36■■□□□ 1.33
PPP4R1Q8TF05 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PPP4R1Q8TF05 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
PPP4R1Q8TF05 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PPP4R1Q8TF05 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PPP4R1Q8TF05 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PPP4R1Q8TF05 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PPP4R1Q8TF05 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PPP4R1Q8TF05 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.34■■□□□ 1.33
PPP4R1Q8TF05 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PPP4R1Q8TF05 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PPP4R1Q8TF05 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PPP4R1Q8TF05 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PPP4R1Q8TF05 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PPP4R1Q8TF05 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
PPP4R1Q8TF05 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PPP4R1Q8TF05 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.33■■□□□ 1.33
PPP4R1Q8TF05 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.33■■□□□ 1.33
PPP4R1Q8TF05 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.33■■□□□ 1.33
PPP4R1Q8TF05 AC141586.4-201ENST00000624558 1573 ntBASIC23.32■■□□□ 1.32
PPP4R1Q8TF05 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PPP4R1Q8TF05 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PPP4R1Q8TF05 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PPP4R1Q8TF05 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PPP4R1Q8TF05 AL157400.5-201ENST00000507624 621 ntBASIC23.32■■□□□ 1.32
PPP4R1Q8TF05 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PPP4R1Q8TF05 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PPP4R1Q8TF05 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PPP4R1Q8TF05 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.31■■□□□ 1.32
PPP4R1Q8TF05 MIR3960-201ENST00000583311 91 ntBASIC23.31■■□□□ 1.32
PPP4R1Q8TF05 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.31■■□□□ 1.32
PPP4R1Q8TF05 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PPP4R1Q8TF05 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PPP4R1Q8TF05 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PPP4R1Q8TF05 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.31■■□□□ 1.32
PPP4R1Q8TF05 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.31■■□□□ 1.32
PPP4R1Q8TF05 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
PPP4R1Q8TF05 AC133561.1-201ENST00000568600 2415 ntBASIC23.31■■□□□ 1.32
PPP4R1Q8TF05 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PPP4R1Q8TF05 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PPP4R1Q8TF05 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PPP4R1Q8TF05 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PPP4R1Q8TF05 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PPP4R1Q8TF05 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.3■■□□□ 1.32
PPP4R1Q8TF05 AC012676.1-201ENST00000574705 1949 ntBASIC23.29■■□□□ 1.32
PPP4R1Q8TF05 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.29■■□□□ 1.32
PPP4R1Q8TF05 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PPP4R1Q8TF05 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.29■■□□□ 1.32
PPP4R1Q8TF05 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PPP4R1Q8TF05 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.29■■□□□ 1.32
PPP4R1Q8TF05 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
PPP4R1Q8TF05 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PPP4R1Q8TF05 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PPP4R1Q8TF05 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
PPP4R1Q8TF05 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PPP4R1Q8TF05 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PPP4R1Q8TF05 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PPP4R1Q8TF05 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.28■■□□□ 1.32
PPP4R1Q8TF05 AC025884.2-201ENST00000553429 711 ntBASIC23.28■■□□□ 1.32
PPP4R1Q8TF05 SMPD5-203ENST00000639008 1464 ntBASIC23.28■■□□□ 1.32
PPP4R1Q8TF05 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PPP4R1Q8TF05 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PPP4R1Q8TF05 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.27■■□□□ 1.32
PPP4R1Q8TF05 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PPP4R1Q8TF05 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PPP4R1Q8TF05 AC092296.2-201ENST00000589470 999 ntBASIC23.27■■□□□ 1.32
PPP4R1Q8TF05 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.27■■□□□ 1.32
PPP4R1Q8TF05 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
PPP4R1Q8TF05 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
PPP4R1Q8TF05 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PPP4R1Q8TF05 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
PPP4R1Q8TF05 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.27■■□□□ 1.32
PPP4R1Q8TF05 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PPP4R1Q8TF05 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PPP4R1Q8TF05 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.26■■□□□ 1.31
PPP4R1Q8TF05 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PPP4R1Q8TF05 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
PPP4R1Q8TF05 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PPP4R1Q8TF05 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.26■■□□□ 1.31
PPP4R1Q8TF05 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PPP4R1Q8TF05 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
PPP4R1Q8TF05 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PPP4R1Q8TF05 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.25■■□□□ 1.31
PPP4R1Q8TF05 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PPP4R1Q8TF05 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.25■■□□□ 1.31
PPP4R1Q8TF05 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.25■■□□□ 1.31
PPP4R1Q8TF05 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.25■■□□□ 1.31
PPP4R1Q8TF05 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PPP4R1Q8TF05 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PPP4R1Q8TF05 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PPP4R1Q8TF05 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.25■■□□□ 1.31
PPP4R1Q8TF05 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PPP4R1Q8TF05 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PPP4R1Q8TF05 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PPP4R1Q8TF05 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
PPP4R1Q8TF05 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PPP4R1Q8TF05 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.24■■□□□ 1.31
PPP4R1Q8TF05 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms