Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.89■□□□□ 0.93
ZIC4Q8N9L1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.89■□□□□ 0.93
ZIC4Q8N9L1 AC022616.5-201ENST00000518796 181 ntBASIC20.89■□□□□ 0.93
ZIC4Q8N9L1 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.89■□□□□ 0.93
ZIC4Q8N9L1 MIR4508-201ENST00000584178 70 ntBASIC20.89■□□□□ 0.93
ZIC4Q8N9L1 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
ZIC4Q8N9L1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ZIC4Q8N9L1 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
ZIC4Q8N9L1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZIC4Q8N9L1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.88■□□□□ 0.93
ZIC4Q8N9L1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.88■□□□□ 0.93
ZIC4Q8N9L1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.87■□□□□ 0.93
ZIC4Q8N9L1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZIC4Q8N9L1 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZIC4Q8N9L1 AC138932.3-201ENST00000567634 1902 ntBASIC20.87■□□□□ 0.93
ZIC4Q8N9L1 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
ZIC4Q8N9L1 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.87■□□□□ 0.93
ZIC4Q8N9L1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
ZIC4Q8N9L1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.87■□□□□ 0.93
ZIC4Q8N9L1 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZIC4Q8N9L1 KRT8P33-201ENST00000508125 1423 ntBASIC20.87■□□□□ 0.93
ZIC4Q8N9L1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.87■□□□□ 0.93
ZIC4Q8N9L1 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.87■□□□□ 0.93
ZIC4Q8N9L1 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZIC4Q8N9L1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZIC4Q8N9L1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZIC4Q8N9L1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZIC4Q8N9L1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZIC4Q8N9L1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.86■□□□□ 0.93
ZIC4Q8N9L1 MIR6089-201ENST00000616698 64 ntBASIC20.86■□□□□ 0.93
ZIC4Q8N9L1 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZIC4Q8N9L1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZIC4Q8N9L1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZIC4Q8N9L1 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.85■□□□□ 0.93
ZIC4Q8N9L1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.85■□□□□ 0.93
ZIC4Q8N9L1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.85■□□□□ 0.93
ZIC4Q8N9L1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZIC4Q8N9L1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.85■□□□□ 0.93
ZIC4Q8N9L1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.85■□□□□ 0.93
ZIC4Q8N9L1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
ZIC4Q8N9L1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.84■□□□□ 0.93
ZIC4Q8N9L1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.84■□□□□ 0.93
ZIC4Q8N9L1 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZIC4Q8N9L1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.84■□□□□ 0.93
ZIC4Q8N9L1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
ZIC4Q8N9L1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.84■□□□□ 0.93
ZIC4Q8N9L1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.84■□□□□ 0.93
ZIC4Q8N9L1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZIC4Q8N9L1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.84■□□□□ 0.93
ZIC4Q8N9L1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
ZIC4Q8N9L1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.83■□□□□ 0.93
ZIC4Q8N9L1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZIC4Q8N9L1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.83■□□□□ 0.93
ZIC4Q8N9L1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.83■□□□□ 0.93
ZIC4Q8N9L1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZIC4Q8N9L1 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ZIC4Q8N9L1 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
ZIC4Q8N9L1 AC090877.2-201ENST00000558441 1738 ntBASIC20.82■□□□□ 0.92
ZIC4Q8N9L1 YBX1P4-201ENST00000392794 808 ntBASIC20.82■□□□□ 0.92
ZIC4Q8N9L1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZIC4Q8N9L1 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZIC4Q8N9L1 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
ZIC4Q8N9L1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZIC4Q8N9L1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZIC4Q8N9L1 AC103724.3-201ENST00000564481 992 ntBASIC20.81■□□□□ 0.92
ZIC4Q8N9L1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZIC4Q8N9L1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZIC4Q8N9L1 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZIC4Q8N9L1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZIC4Q8N9L1 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.8■□□□□ 0.92
ZIC4Q8N9L1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
ZIC4Q8N9L1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZIC4Q8N9L1 KRT18P24-201ENST00000344739 1156 ntBASIC20.8■□□□□ 0.92
ZIC4Q8N9L1 RARRES2P1-201ENST00000474487 481 ntBASIC20.8■□□□□ 0.92
ZIC4Q8N9L1 AC120024.1-201ENST00000562672 995 ntBASIC20.8■□□□□ 0.92
ZIC4Q8N9L1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZIC4Q8N9L1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.8■□□□□ 0.92
ZIC4Q8N9L1 AP003733.4-201ENST00000623785 1697 ntBASIC20.8■□□□□ 0.92
ZIC4Q8N9L1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.79■□□□□ 0.92
ZIC4Q8N9L1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZIC4Q8N9L1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.79■□□□□ 0.92
ZIC4Q8N9L1 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZIC4Q8N9L1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZIC4Q8N9L1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
ZIC4Q8N9L1 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.79■□□□□ 0.92
ZIC4Q8N9L1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
ZIC4Q8N9L1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ZIC4Q8N9L1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZIC4Q8N9L1 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZIC4Q8N9L1 AC011551.1-201ENST00000614101 683 ntBASIC20.78■□□□□ 0.92
ZIC4Q8N9L1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.78■□□□□ 0.92
ZIC4Q8N9L1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.78■□□□□ 0.92
ZIC4Q8N9L1 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.78■□□□□ 0.92
ZIC4Q8N9L1 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZIC4Q8N9L1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.78■□□□□ 0.92
ZIC4Q8N9L1 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZIC4Q8N9L1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ZIC4Q8N9L1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.77■□□□□ 0.92
ZIC4Q8N9L1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.77■□□□□ 0.92
ZIC4Q8N9L1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms