Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ZC3H3Q8IXZ2 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ZC3H3Q8IXZ2 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
ZC3H3Q8IXZ2 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ZC3H3Q8IXZ2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ZC3H3Q8IXZ2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.66■■□□□ 1.7
ZC3H3Q8IXZ2 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25.66■■□□□ 1.7
ZC3H3Q8IXZ2 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ZC3H3Q8IXZ2 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ZC3H3Q8IXZ2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ZC3H3Q8IXZ2 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
ZC3H3Q8IXZ2 NTF6A-201ENST00000591175 560 ntBASIC25.65■■□□□ 1.7
ZC3H3Q8IXZ2 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
ZC3H3Q8IXZ2 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
ZC3H3Q8IXZ2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
ZC3H3Q8IXZ2 LONRF2P2-201ENST00000439212 571 ntBASIC25.64■■□□□ 1.7
ZC3H3Q8IXZ2 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC25.64■■□□□ 1.7
ZC3H3Q8IXZ2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.64■■□□□ 1.7
ZC3H3Q8IXZ2 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
ZC3H3Q8IXZ2 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC25.63■■□□□ 1.69
ZC3H3Q8IXZ2 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
ZC3H3Q8IXZ2 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
ZC3H3Q8IXZ2 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
ZC3H3Q8IXZ2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.63■■□□□ 1.69
ZC3H3Q8IXZ2 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
ZC3H3Q8IXZ2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
ZC3H3Q8IXZ2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.63■■□□□ 1.69
ZC3H3Q8IXZ2 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC25.62■■□□□ 1.69
ZC3H3Q8IXZ2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
ZC3H3Q8IXZ2 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
ZC3H3Q8IXZ2 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ZC3H3Q8IXZ2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
ZC3H3Q8IXZ2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ZC3H3Q8IXZ2 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
ZC3H3Q8IXZ2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ZC3H3Q8IXZ2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
ZC3H3Q8IXZ2 HLA-L-211ENST00000482052 1765 ntBASIC25.61■■□□□ 1.69
ZC3H3Q8IXZ2 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
ZC3H3Q8IXZ2 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
ZC3H3Q8IXZ2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
ZC3H3Q8IXZ2 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC25.61■■□□□ 1.69
ZC3H3Q8IXZ2 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
ZC3H3Q8IXZ2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.61■■□□□ 1.69
ZC3H3Q8IXZ2 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
ZC3H3Q8IXZ2 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
ZC3H3Q8IXZ2 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
ZC3H3Q8IXZ2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC25.61■■□□□ 1.69
ZC3H3Q8IXZ2 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ZC3H3Q8IXZ2 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
ZC3H3Q8IXZ2 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ZC3H3Q8IXZ2 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC25.6■■□□□ 1.69
ZC3H3Q8IXZ2 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC25.6■■□□□ 1.69
ZC3H3Q8IXZ2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ZC3H3Q8IXZ2 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
ZC3H3Q8IXZ2 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC25.6■■□□□ 1.69
ZC3H3Q8IXZ2 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.59■■□□□ 1.69
ZC3H3Q8IXZ2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
ZC3H3Q8IXZ2 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ZC3H3Q8IXZ2 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
ZC3H3Q8IXZ2 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ZC3H3Q8IXZ2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ZC3H3Q8IXZ2 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
ZC3H3Q8IXZ2 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
ZC3H3Q8IXZ2 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC25.58■■□□□ 1.69
ZC3H3Q8IXZ2 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ZC3H3Q8IXZ2 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
ZC3H3Q8IXZ2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
ZC3H3Q8IXZ2 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC25.57■■□□□ 1.68
ZC3H3Q8IXZ2 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC25.57■■□□□ 1.68
ZC3H3Q8IXZ2 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ZC3H3Q8IXZ2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.56■■□□□ 1.68
ZC3H3Q8IXZ2 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
ZC3H3Q8IXZ2 AL592295.1-201ENST00000400984 884 ntBASIC25.56■■□□□ 1.68
ZC3H3Q8IXZ2 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC25.56■■□□□ 1.68
ZC3H3Q8IXZ2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
ZC3H3Q8IXZ2 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ZC3H3Q8IXZ2 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
ZC3H3Q8IXZ2 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC25.55■■□□□ 1.68
ZC3H3Q8IXZ2 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25.55■■□□□ 1.68
ZC3H3Q8IXZ2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
ZC3H3Q8IXZ2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.55■■□□□ 1.68
ZC3H3Q8IXZ2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC25.55■■□□□ 1.68
ZC3H3Q8IXZ2 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ZC3H3Q8IXZ2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ZC3H3Q8IXZ2 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25.54■■□□□ 1.68
ZC3H3Q8IXZ2 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ZC3H3Q8IXZ2 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
ZC3H3Q8IXZ2 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
ZC3H3Q8IXZ2 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC25.54■■□□□ 1.68
ZC3H3Q8IXZ2 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ZC3H3Q8IXZ2 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC25.54■■□□□ 1.68
ZC3H3Q8IXZ2 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
ZC3H3Q8IXZ2 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ZC3H3Q8IXZ2 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
ZC3H3Q8IXZ2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.54■■□□□ 1.68
ZC3H3Q8IXZ2 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.54■■□□□ 1.68
ZC3H3Q8IXZ2 AC090877.2-201ENST00000558441 1738 ntBASIC25.54■■□□□ 1.68
ZC3H3Q8IXZ2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ZC3H3Q8IXZ2 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ZC3H3Q8IXZ2 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 215.5 ms