Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC24.9■■□□□ 1.58
RNF135Q8IUD6 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
RNF135Q8IUD6 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC24.9■■□□□ 1.58
RNF135Q8IUD6 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RNF135Q8IUD6 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
RNF135Q8IUD6 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.58
RNF135Q8IUD6 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.58
RNF135Q8IUD6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.89■■□□□ 1.58
RNF135Q8IUD6 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.57
RNF135Q8IUD6 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.89■■□□□ 1.57
RNF135Q8IUD6 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
RNF135Q8IUD6 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.57
RNF135Q8IUD6 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RNF135Q8IUD6 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC24.88■■□□□ 1.57
RNF135Q8IUD6 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RNF135Q8IUD6 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RNF135Q8IUD6 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
RNF135Q8IUD6 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.88■■□□□ 1.57
RNF135Q8IUD6 AC142472.1-201ENST00000612013 1741 ntBASIC24.88■■□□□ 1.57
RNF135Q8IUD6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RNF135Q8IUD6 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
RNF135Q8IUD6 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.87■■□□□ 1.57
RNF135Q8IUD6 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC24.87■■□□□ 1.57
RNF135Q8IUD6 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
RNF135Q8IUD6 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RNF135Q8IUD6 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RNF135Q8IUD6 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
RNF135Q8IUD6 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
RNF135Q8IUD6 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC24.86■■□□□ 1.57
RNF135Q8IUD6 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC24.86■■□□□ 1.57
RNF135Q8IUD6 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
RNF135Q8IUD6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RNF135Q8IUD6 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RNF135Q8IUD6 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
RNF135Q8IUD6 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
RNF135Q8IUD6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RNF135Q8IUD6 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.84■■□□□ 1.57
RNF135Q8IUD6 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RNF135Q8IUD6 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RNF135Q8IUD6 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC24.84■■□□□ 1.57
RNF135Q8IUD6 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RNF135Q8IUD6 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC24.84■■□□□ 1.57
RNF135Q8IUD6 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC24.84■■□□□ 1.57
RNF135Q8IUD6 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RNF135Q8IUD6 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RNF135Q8IUD6 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
RNF135Q8IUD6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.57
RNF135Q8IUD6 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.83■■□□□ 1.57
RNF135Q8IUD6 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC24.83■■□□□ 1.57
RNF135Q8IUD6 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC24.83■■□□□ 1.57
RNF135Q8IUD6 RASSF1-AS1-201ENST00000629828 790 ntBASIC24.83■■□□□ 1.57
RNF135Q8IUD6 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.82■■□□□ 1.56
RNF135Q8IUD6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.82■■□□□ 1.56
RNF135Q8IUD6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RNF135Q8IUD6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
RNF135Q8IUD6 SUDS3P1-201ENST00000505831 966 ntBASIC24.82■■□□□ 1.56
RNF135Q8IUD6 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
RNF135Q8IUD6 AL031432.3-201ENST00000607698 485 ntBASIC24.81■■□□□ 1.56
RNF135Q8IUD6 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC24.81■■□□□ 1.56
RNF135Q8IUD6 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.81■■□□□ 1.56
RNF135Q8IUD6 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RNF135Q8IUD6 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
RNF135Q8IUD6 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RNF135Q8IUD6 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
RNF135Q8IUD6 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.8■■□□□ 1.56
RNF135Q8IUD6 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
RNF135Q8IUD6 PARL-206ENST00000435888 1098 ntTSL 5 BASIC24.8■■□□□ 1.56
RNF135Q8IUD6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RNF135Q8IUD6 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
RNF135Q8IUD6 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
RNF135Q8IUD6 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
RNF135Q8IUD6 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RNF135Q8IUD6 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC24.8■■□□□ 1.56
RNF135Q8IUD6 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
RNF135Q8IUD6 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.79■■□□□ 1.56
RNF135Q8IUD6 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC24.79■■□□□ 1.56
RNF135Q8IUD6 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
RNF135Q8IUD6 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RNF135Q8IUD6 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RNF135Q8IUD6 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
RNF135Q8IUD6 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC24.78■■□□□ 1.56
RNF135Q8IUD6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
RNF135Q8IUD6 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.78■■□□□ 1.56
RNF135Q8IUD6 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.78■■□□□ 1.56
RNF135Q8IUD6 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
RNF135Q8IUD6 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC24.77■■□□□ 1.56
RNF135Q8IUD6 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.77■■□□□ 1.56
RNF135Q8IUD6 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RNF135Q8IUD6 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RNF135Q8IUD6 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
RNF135Q8IUD6 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RNF135Q8IUD6 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC24.77■■□□□ 1.56
RNF135Q8IUD6 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
RNF135Q8IUD6 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
RNF135Q8IUD6 UNC93B3-201ENST00000308076 687 ntBASIC24.76■■□□□ 1.55
RNF135Q8IUD6 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.76■■□□□ 1.55
RNF135Q8IUD6 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
RNF135Q8IUD6 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RNF135Q8IUD6 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
RNF135Q8IUD6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC24.76■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms