Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RAB43Q86YS6 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.27■■□□□ 1.16
RAB43Q86YS6 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.27■■□□□ 1.16
RAB43Q86YS6 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RAB43Q86YS6 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC22.27■■□□□ 1.16
RAB43Q86YS6 GRAMD4P7-201ENST00000578182 1232 ntBASIC22.27■■□□□ 1.16
RAB43Q86YS6 AC020928.2-201ENST00000588717 2197 ntBASIC22.27■■□□□ 1.16
RAB43Q86YS6 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RAB43Q86YS6 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RAB43Q86YS6 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
RAB43Q86YS6 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.26■■□□□ 1.15
RAB43Q86YS6 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.26■■□□□ 1.15
RAB43Q86YS6 AC137630.3-201ENST00000607245 391 ntBASIC22.26■■□□□ 1.15
RAB43Q86YS6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.26■■□□□ 1.15
RAB43Q86YS6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC22.26■■□□□ 1.15
RAB43Q86YS6 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
RAB43Q86YS6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.26■■□□□ 1.15
RAB43Q86YS6 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
RAB43Q86YS6 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.25■■□□□ 1.15
RAB43Q86YS6 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
RAB43Q86YS6 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RAB43Q86YS6 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RAB43Q86YS6 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.25■■□□□ 1.15
RAB43Q86YS6 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RAB43Q86YS6 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RAB43Q86YS6 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.24■■□□□ 1.15
RAB43Q86YS6 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RAB43Q86YS6 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RAB43Q86YS6 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RAB43Q86YS6 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
RAB43Q86YS6 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
RAB43Q86YS6 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RAB43Q86YS6 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RAB43Q86YS6 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RAB43Q86YS6 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.23■■□□□ 1.15
RAB43Q86YS6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.23■■□□□ 1.15
RAB43Q86YS6 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.23■■□□□ 1.15
RAB43Q86YS6 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.23■■□□□ 1.15
RAB43Q86YS6 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
RAB43Q86YS6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RAB43Q86YS6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.22■■□□□ 1.15
RAB43Q86YS6 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.22■■□□□ 1.15
RAB43Q86YS6 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RAB43Q86YS6 AC091060.1-201ENST00000623524 1766 ntBASIC22.22■■□□□ 1.15
RAB43Q86YS6 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RAB43Q86YS6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
RAB43Q86YS6 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.21■■□□□ 1.15
RAB43Q86YS6 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RAB43Q86YS6 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
RAB43Q86YS6 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.21■■□□□ 1.15
RAB43Q86YS6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RAB43Q86YS6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RAB43Q86YS6 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RAB43Q86YS6 KRT16P3-201ENST00000439127 1283 ntBASIC22.21■■□□□ 1.15
RAB43Q86YS6 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.21■■□□□ 1.15
RAB43Q86YS6 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
RAB43Q86YS6 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.2■■□□□ 1.14
RAB43Q86YS6 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
RAB43Q86YS6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RAB43Q86YS6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RAB43Q86YS6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RAB43Q86YS6 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RAB43Q86YS6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.19■■□□□ 1.14
RAB43Q86YS6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RAB43Q86YS6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RAB43Q86YS6 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RAB43Q86YS6 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RAB43Q86YS6 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.19■■□□□ 1.14
RAB43Q86YS6 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
RAB43Q86YS6 MIR4281-201ENST00000580852 62 ntBASIC22.19■■□□□ 1.14
RAB43Q86YS6 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.19■■□□□ 1.14
RAB43Q86YS6 AC011551.1-201ENST00000614101 683 ntBASIC22.19■■□□□ 1.14
RAB43Q86YS6 AC021242.3-201ENST00000607598 1377 ntBASIC22.19■■□□□ 1.14
RAB43Q86YS6 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.19■■□□□ 1.14
RAB43Q86YS6 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.19■■□□□ 1.14
RAB43Q86YS6 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.18■■□□□ 1.14
RAB43Q86YS6 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RAB43Q86YS6 UNC93B8-201ENST00000511903 705 ntBASIC22.18■■□□□ 1.14
RAB43Q86YS6 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RAB43Q86YS6 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
RAB43Q86YS6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAB43Q86YS6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAB43Q86YS6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
RAB43Q86YS6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.17■■□□□ 1.14
RAB43Q86YS6 TSPY9P-201ENST00000440215 945 ntBASIC22.17■■□□□ 1.14
RAB43Q86YS6 TSPY11P-201ENST00000442607 1045 ntBASIC22.17■■□□□ 1.14
RAB43Q86YS6 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
RAB43Q86YS6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAB43Q86YS6 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
RAB43Q86YS6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.16■■□□□ 1.14
RAB43Q86YS6 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.16■■□□□ 1.14
RAB43Q86YS6 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.16■■□□□ 1.14
RAB43Q86YS6 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RAB43Q86YS6 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RAB43Q86YS6 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.16■■□□□ 1.14
RAB43Q86YS6 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RAB43Q86YS6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
RAB43Q86YS6 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.15■■□□□ 1.14
RAB43Q86YS6 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RAB43Q86YS6 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms