Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
UBE3BQ7Z3V4 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
UBE3BQ7Z3V4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
UBE3BQ7Z3V4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
UBE3BQ7Z3V4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
UBE3BQ7Z3V4 GRAMD4P7-201ENST00000578182 1232 ntBASIC29.51■■■□□ 2.31
UBE3BQ7Z3V4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC29.5■■■□□ 2.31
UBE3BQ7Z3V4 TSPY9P-201ENST00000440215 945 ntBASIC29.5■■■□□ 2.31
UBE3BQ7Z3V4 TSPY11P-201ENST00000442607 1045 ntBASIC29.5■■■□□ 2.31
UBE3BQ7Z3V4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC29.5■■■□□ 2.31
UBE3BQ7Z3V4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC29.5■■■□□ 2.31
UBE3BQ7Z3V4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC29.5■■■□□ 2.31
UBE3BQ7Z3V4 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC29.5■■■□□ 2.31
UBE3BQ7Z3V4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC29.49■■■□□ 2.31
UBE3BQ7Z3V4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC29.49■■■□□ 2.31
UBE3BQ7Z3V4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC29.49■■■□□ 2.31
UBE3BQ7Z3V4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
UBE3BQ7Z3V4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC29.48■■■□□ 2.31
UBE3BQ7Z3V4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
UBE3BQ7Z3V4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC29.48■■■□□ 2.31
UBE3BQ7Z3V4 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC29.48■■■□□ 2.31
UBE3BQ7Z3V4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC29.48■■■□□ 2.31
UBE3BQ7Z3V4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC29.48■■■□□ 2.31
UBE3BQ7Z3V4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC29.48■■■□□ 2.31
UBE3BQ7Z3V4 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC29.48■■■□□ 2.31
UBE3BQ7Z3V4 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
UBE3BQ7Z3V4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC29.47■■■□□ 2.31
UBE3BQ7Z3V4 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC29.47■■■□□ 2.31
UBE3BQ7Z3V4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC29.47■■■□□ 2.31
UBE3BQ7Z3V4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC29.47■■■□□ 2.31
UBE3BQ7Z3V4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC29.47■■■□□ 2.31
UBE3BQ7Z3V4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC29.47■■■□□ 2.31
UBE3BQ7Z3V4 AC092028.1-203ENST00000608262 953 ntBASIC29.47■■■□□ 2.31
UBE3BQ7Z3V4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC29.47■■■□□ 2.31
UBE3BQ7Z3V4 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
UBE3BQ7Z3V4 AC090877.2-201ENST00000558441 1738 ntBASIC29.47■■■□□ 2.31
UBE3BQ7Z3V4 AF131216.4-201ENST00000638924 1588 ntBASIC29.47■■■□□ 2.31
UBE3BQ7Z3V4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
UBE3BQ7Z3V4 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
UBE3BQ7Z3V4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC29.46■■■□□ 2.31
UBE3BQ7Z3V4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
UBE3BQ7Z3V4 AC145676.1-201ENST00000514988 2004 ntBASIC29.46■■■□□ 2.31
UBE3BQ7Z3V4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC29.46■■■□□ 2.31
UBE3BQ7Z3V4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC29.46■■■□□ 2.31
UBE3BQ7Z3V4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
UBE3BQ7Z3V4 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC29.45■■■□□ 2.31
UBE3BQ7Z3V4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC29.45■■■□□ 2.31
UBE3BQ7Z3V4 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
UBE3BQ7Z3V4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC29.45■■■□□ 2.3
UBE3BQ7Z3V4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC29.45■■■□□ 2.3
UBE3BQ7Z3V4 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
UBE3BQ7Z3V4 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC29.44■■■□□ 2.3
UBE3BQ7Z3V4 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
UBE3BQ7Z3V4 KRT16P3-201ENST00000439127 1283 ntBASIC29.44■■■□□ 2.3
UBE3BQ7Z3V4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC29.44■■■□□ 2.3
UBE3BQ7Z3V4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC29.43■■■□□ 2.3
UBE3BQ7Z3V4 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC29.43■■■□□ 2.3
UBE3BQ7Z3V4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
UBE3BQ7Z3V4 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
UBE3BQ7Z3V4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
UBE3BQ7Z3V4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC29.42■■■□□ 2.3
UBE3BQ7Z3V4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC29.42■■■□□ 2.3
UBE3BQ7Z3V4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
UBE3BQ7Z3V4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC29.42■■■□□ 2.3
UBE3BQ7Z3V4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
UBE3BQ7Z3V4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC29.41■■■□□ 2.3
UBE3BQ7Z3V4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
UBE3BQ7Z3V4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
UBE3BQ7Z3V4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC29.41■■■□□ 2.3
UBE3BQ7Z3V4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC29.41■■■□□ 2.3
UBE3BQ7Z3V4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC29.41■■■□□ 2.3
UBE3BQ7Z3V4 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
UBE3BQ7Z3V4 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC29.4■■■□□ 2.3
UBE3BQ7Z3V4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC29.4■■■□□ 2.3
UBE3BQ7Z3V4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC29.4■■■□□ 2.3
UBE3BQ7Z3V4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC29.4■■■□□ 2.3
UBE3BQ7Z3V4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC29.4■■■□□ 2.3
UBE3BQ7Z3V4 SLC6A10P-202ENST00000431994 2058 ntBASIC29.4■■■□□ 2.3
UBE3BQ7Z3V4 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
UBE3BQ7Z3V4 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC29.38■■■□□ 2.29
UBE3BQ7Z3V4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC29.38■■■□□ 2.29
UBE3BQ7Z3V4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC29.38■■■□□ 2.29
UBE3BQ7Z3V4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC29.38■■■□□ 2.29
UBE3BQ7Z3V4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC29.38■■■□□ 2.29
UBE3BQ7Z3V4 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC29.38■■■□□ 2.29
UBE3BQ7Z3V4 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
UBE3BQ7Z3V4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC29.36■■■□□ 2.29
UBE3BQ7Z3V4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC29.36■■■□□ 2.29
UBE3BQ7Z3V4 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC29.36■■■□□ 2.29
UBE3BQ7Z3V4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC29.36■■■□□ 2.29
UBE3BQ7Z3V4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
UBE3BQ7Z3V4 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC29.35■■■□□ 2.29
UBE3BQ7Z3V4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC29.35■■■□□ 2.29
UBE3BQ7Z3V4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC29.35■■■□□ 2.29
UBE3BQ7Z3V4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC29.35■■■□□ 2.29
UBE3BQ7Z3V4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC29.35■■■□□ 2.29
UBE3BQ7Z3V4 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
UBE3BQ7Z3V4 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
UBE3BQ7Z3V4 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
UBE3BQ7Z3V4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms